| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3906 |
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| Symbol | |
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| ID | 4690182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4170576 |
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| End bp | 4171514 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836924 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_984123 |
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| Protein GI | 121606794 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.101389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCG TTAAATTTGC AGAAAACCTG TCGATGTTCG TGGACGTGGC GCAGGCCAGG
AGTTTCTCGG TCGTCGCGCG ACGCCAGGGA ATGGTCGCCT CATCGGTGGC ACGCCAGATC
GACGCCCTGG AGCAGGACCT GAAGGTCGCG CTCTTCACGC GTTCCACCCG CGCGCTCGTG
ATGACCGATG CGGGGCAGCT GCTGTTTGAC CGAGCCGTCA AGCTGTTGAG CGACATGACC
GAGGTGCGCG GCGAGGTGGT GTCGCTGGAG CAAAAGGTGC AAGGCCTGCT GCGCGTCAGC
TGCGTGCCCG CTTTTGGCCG CCGCCATGTG GTGCCGCACC TCGGTTCGCT GTTCGAGAAG
CATCCCGACT TGCGCGTGGA GCTGGAACTC ACCGAGCGGG TGGTGGATGC GGTGCTCGAA
CGCTTCGATC TTGTGATTCG CGTCGGTCCT CAGCCTGACA GCAGCATGAT CAGCCAGCGC
ATCGGCAACC AGCGCTACAT CGTCGGGGCT TCGCCGGCCT ACCTCGAACG CCATGGGCAT
CCCACGCATT TCGACGAACT GGCCCGGCAC CGGCTGATCG ACCGGCAGCA CAACACCGCG
GCGCGCGGCT GGCGTGAACT CGTCGGCCAC AACGGCCTGC TGCCGGCGCA GTTTGCTTTC
GAGTGCGATG ACTGCGATGC GCGCCGCCTC TCGGCGGCCC AGGGGCTCGG CATTGCCTTG
ATGCCCAACT GGGCCATCGG CGAAGACCTG GCGGCAGGGC GTCTCGTCGA GCTTGAACTG
GCGGGCCTTG CGGCGCAGCC GGTGTCGGGC ATTTTCCTGA TGCGGGCCGC GCCGCGCGCC
AATTCAAAGA CCCGGGCCTT CACCCAGCAC CTGCTCGACA GCATCGGACG CTCCGCCAGC
TGGGTGCGCG ATGCCGCGAC GGCAAAGCCG GCCTCGTAG
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| Protein sequence | MKSVKFAENL SMFVDVAQAR SFSVVARRQG MVASSVARQI DALEQDLKVA LFTRSTRALV
MTDAGQLLFD RAVKLLSDMT EVRGEVVSLE QKVQGLLRVS CVPAFGRRHV VPHLGSLFEK
HPDLRVELEL TERVVDAVLE RFDLVIRVGP QPDSSMISQR IGNQRYIVGA SPAYLERHGH
PTHFDELARH RLIDRQHNTA ARGWRELVGH NGLLPAQFAF ECDDCDARRL SAAQGLGIAL
MPNWAIGEDL AAGRLVELEL AGLAAQPVSG IFLMRAAPRA NSKTRAFTQH LLDSIGRSAS
WVRDAATAKP AS
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