| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3895 |
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| Symbol | |
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| ID | 4689716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4152652 |
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| End bp | 4154748 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836913 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_984112 |
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| Protein GI | 121606783 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.249518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGA AGTTTCCCCG GCTGGCCCGT TGGGCCAGCC AGCGCATTTC CCTGTGGCTT
GTGCTGCTGG CGCTGCTGGT GGCCCTGCTG GGGCTGCTGA TCTGGCTGGC CGGGCGCTAC
GAAGCGAGCG TGCTGCAAAG CCGGCTTGAA GACAATGCGG CGCAAGCCGT GACCGATATC
CGCTCCGGCC TGAACCGCAA CCTTCAGGCT TTTCAGGCCC TGCATGCCCG CGAGCGCGGC
CTTGACGCCT GGCAGGCGCC GGCAGGCCAG TTGCTGCATG AGCACAGCGA AATCCTGCGG
CTGGAGTGGC GCAACGAAAC GCTCGGCATG CTTGGCTTTG TCGAGACACC GTTTCGCAAG
CCGGTGTTTG AAAAGCTGGA CCGCCCCAGC CTGCAGGCCG ACGTGAGCCT GACCTGCACC
TCTGCCCGCC GCCTGAGCGG CCCGGCTTAT TCGCTCAGCT ATTTTCTGCC GCAATCCGAC
GGGCTGGGCA TGGAAGTGAT CGACATGTGC CTGCCCCTCA TGGAGTCGGG CCGCCTGACG
GGCTATGTCG TGGCCACCTA TTCGCTGCAA AACCTGCTGG CCGAAGTGGT CAGCAAGCCT
TTGTCACAAG GCGTCGGGCT GTCCCTGACC GAGGCCGACG GCACGCGCCT GGCGATGTAC
GGGGTGCCGG CACGCGGAAG CCGTGCGTTC GTGGCCCGGC AGCTGCTCGA CTTGCCGGGC
AGCACGATGG TGGTCCGGAT GGAAAGCCGG CGCGGCACCC CGGCCCTGTT TCCCAACGTC
CTGACGGCGC TGGTGACCGC TATGTCGCTG GTGCTGCTGG TCGTGCTGTT CCTGCTGGGA
CGCGACATGC GGCGGCGCCT GCAGGTCGAG CACGACCTGG GCGAGGCGCT GGCCTTTCGC
AAGGCGATGG AAAACTCGCT GCTGACCGGC CTGCGCGCCC GCGACCTGCA GGGCCGCATC
ACCTACGTCA ATCCGGCTTT TTGCAAGATG GTGGGGGTCG ATGCCCAGGA GTTGCTCAAC
CAGAGCATGC CTTCGCCGTA CTGGCCGCCC GAACTGGCGA ACGCCTACCA GCGGCGCCAG
GAAATGCGCC TGGCCGGCAA TCAGCTGCCC CGGGAGGGCC ATGAATCGGT CTTCATGCGC
AAGGACGGCA CGCGCTTTCC GGTGCTCATC ATGGAGGCGC CGCTGATCAA TGCGGTGGGC
AAGCACACCG GCTGGATGAG CACCATCCTG GACGTCAGCG AGCAGCGCCG CACCGAGGAA
CTCTCGCGCG CCAGCCAGGA CCGCCTGCAG GCCAGCGCCC GGCTGGCCAT GGTCGGCGAG
ATGGCTTCGC TGCTCAGCCA CGAGCTGAAC CAGCCGCTGG CGGCGATTTC AAGCTACGCC
ACCGGCTCGC TCAATCTGTT GCAGGACGAA GCCCGGGGGG ATCGCGCGCC GGATTCAGTC
GCCCTGTTCG ATGACCTGCA GCTGGCCATG GGCCGCATTG CCGAGCAGGC CGAGCGGGCC
GGCAGGGTCA TCAAGAGCGT GCATGACTTC GTGCGCAGGA GCGAAAGGGT GCGCGAAGCG
GTCCCGCCGC GCGCGCTGCT GGACGCCATC ATGCCGCTGG TGAGCCTGCA GGCGCGCAAG
CTTGGCGTGC AGGTGGCTAC CGTGGTCGAT GACACCTGCC CGCCCGTGCT GTGCGACCGC
ACCATGGTCG AGCAGGTACT GCTCAACCTG GCGCGCAACG GCATGCAGGC TATGCGGGGC
TGCAACGATG CGCAAACCGC AGCGCCAGCC TCGTTGCAGC CCGACAAGGT GCTGACATTG
CGCATTCGCC CGGCCGCCTC CAATGCGCAA AGCCAGTGGG TTGAATTTGC GGTGATCGAC
CAGGGCGAAG GCATTTCCGG CGAAGTGGCC AGGCAACTGT TCACCCCCTT CTTCACCACC
CGCAAAGAGG GCATGGGACT GGGCCTGAGC CTGTGCCGCA CGGTGATCGA GCAGCACGGC
GGTTTCCTCG GCTATGAAAG CGTCCAGCCG CAAGGTACCA TTTTCAGTTT TACCCTGCCG
GTGGCCGCCA TGCCCGGGGC CGGGGAAGAC GCGCATCACC CGCTTGAAGA AAGTTGA
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| Protein sequence | MSLKFPRLAR WASQRISLWL VLLALLVALL GLLIWLAGRY EASVLQSRLE DNAAQAVTDI
RSGLNRNLQA FQALHARERG LDAWQAPAGQ LLHEHSEILR LEWRNETLGM LGFVETPFRK
PVFEKLDRPS LQADVSLTCT SARRLSGPAY SLSYFLPQSD GLGMEVIDMC LPLMESGRLT
GYVVATYSLQ NLLAEVVSKP LSQGVGLSLT EADGTRLAMY GVPARGSRAF VARQLLDLPG
STMVVRMESR RGTPALFPNV LTALVTAMSL VLLVVLFLLG RDMRRRLQVE HDLGEALAFR
KAMENSLLTG LRARDLQGRI TYVNPAFCKM VGVDAQELLN QSMPSPYWPP ELANAYQRRQ
EMRLAGNQLP REGHESVFMR KDGTRFPVLI MEAPLINAVG KHTGWMSTIL DVSEQRRTEE
LSRASQDRLQ ASARLAMVGE MASLLSHELN QPLAAISSYA TGSLNLLQDE ARGDRAPDSV
ALFDDLQLAM GRIAEQAERA GRVIKSVHDF VRRSERVREA VPPRALLDAI MPLVSLQARK
LGVQVATVVD DTCPPVLCDR TMVEQVLLNL ARNGMQAMRG CNDAQTAAPA SLQPDKVLTL
RIRPAASNAQ SQWVEFAVID QGEGISGEVA RQLFTPFFTT RKEGMGLGLS LCRTVIEQHG
GFLGYESVQP QGTIFSFTLP VAAMPGAGED AHHPLEES
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