Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3854 |
Symbol | |
ID | 4688269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4109660 |
End bp | 4110493 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639836872 |
Product | iron permease FTR1 |
Protein accession | YP_984071 |
Protein GI | 121606742 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
TIGRFAM ID | [TIGR00145] FTR1 family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGCCG CCGCACTCAT CGTTTTTCGT GAATCACTGG AAGCTTCGCT GATCATCAGC ATCATGGCCG CCGCCACGCT CGGGATTGCC TCTCGCGGGC GCTGGATAGC CGCCGGAATA CTTGCCGGGC TCGCGGGCGC GGCGCTGGTG GCGTCGAGCA TGGGGCTGAT TTCCGACATG GCCAGCGGCG TCGGCCAGGA ACTGTTCAAT GCCGGCATCC TGATCCTGGC CGTGGGCATG CTGGCCTGGC ACAACATCTG GATGTCGATT CATGGCCGCG AAATGGCCGC GCAGGCCAAG AGCACCGCGC GCGCCATCCA TGACGGCAGC CGCGAGCGTT CCGTGATCTT CATGGTGGTG GCCCTGGCCG TCCTGCGCGA AGGCTCGGAG ACGGTGCTGT TTCTCTACGG CCTGGCCACC AGCAGCGAAG ACGGGCTGCG CAACACCGTT GGCGGCGGGC TTAGCGGCCT GGCGGCGGGC CTGCTGGTCG GCGGCCTGCT GTACGCGGGG CTGCTGCGCA TTCCGTTGCG CTGGTTTTTC TCGATCACCG GCGTCTTCGT CTTGTTGCTG GCCGCCAGCA TGGCTTCGCA GGCCGCCCGC TTCCTGATCC AGGCCGATCT GCTGCCCAGC CTTGGCGCGC CGCTGTGGGA CAGTTCGGGC CTGCTGTCGC AGACCTCGGC GGCCGGAACC CTGCTGCACG GACTGATCGG CTACGAAGCA CAGCCGGCGG GCATGCAGAT TGTGTTTTAC GTGGCGGTCG TGCTGGCCAT CACGGCCGGC ATGCGCTGGG TGAATTCGCG CGGCCCCGTC AGGAATTCAG CCCAGCCAGC CTAG
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Protein sequence | MFAAALIVFR ESLEASLIIS IMAAATLGIA SRGRWIAAGI LAGLAGAALV ASSMGLISDM ASGVGQELFN AGILILAVGM LAWHNIWMSI HGREMAAQAK STARAIHDGS RERSVIFMVV ALAVLREGSE TVLFLYGLAT SSEDGLRNTV GGGLSGLAAG LLVGGLLYAG LLRIPLRWFF SITGVFVLLL AASMASQAAR FLIQADLLPS LGAPLWDSSG LLSQTSAAGT LLHGLIGYEA QPAGMQIVFY VAVVLAITAG MRWVNSRGPV RNSAQPA
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