| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3838 |
|---|
| Symbol | |
|---|
| ID | 4687822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 4094298 |
|---|
| End bp | 4095851 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639836856 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_984055 |
|---|
| Protein GI | 121606726 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAA GTAAATACCT GGCCCTGCCC AAGGGCGTGA GCGAAAACCG CTTTGATGCG
GCCATCAAGA AATTCACCGC TGCCGTGGGC GCCGATCATG TGCTCACCTC GGCTGAGCAC
CTGGCCCCCT ACACCAAAGT GATGATGGCC GTGGAAACGG CCAAACACCA CCCGTCCGCC
GTGATCATGG CCACCAGCGT GGAAGATGTG CAAGCGGTCC TCAAGGTCTG CAACGAATAC
AAGATTCCGG TCTGGACCAT TTCCACCGGA CGCAACTTCG GCTACGGCTC TGCCGCACCC
GTCGAGCGCG GCCAGATCGT GCTGGATCTG AAGAAGATGA ACAAGATCAT CCACATTGAT
CCCGAGTTGT GCACCGCGCT GGTCGAGCCG GGCGTGACTT ATCAGATGCT CTACGACTAC
ATCGAAGAGA ACAAACTGCC GCTGATGCTG TCGTTCCCCG CACCGTCAGC GATTGCCGGC
CCGCTGGGCA ACACCATGGA TCGCGGCGTG GGCTACACCC CCTACGGCGA ACACTTCCTG
ATGCAGTGCG GCATGGAAGT CGTGATGGCC AACGGCGACG TGCTGCGCAC CGGCATGGGC
GGGGTCAAGG GCGACAAGGC TTGGCAGGTT TTCAAGTGGG GTTACGGCCC AACGCTGGAC
GGCATGTTCA CCCAGTCCAA CTACGGCATT TGCACCAAGA TGGGTTTCTG GCTCATGCCC
AAGCCACCGG TGTTCAAGCC GTTCGAGATC CAGTATGAAA ACGAAGCCGA TATCGGTGAA
ATCGTGGAAC TGCTGCGCCC GCTGCGCATC GCCCAGATCA TCCCGAACGC GGTGGTGATT
GCGGGTGTGC TGTGGGAAGC TTCCACCTGC AACACCCGTC GCTCCGACTA CCTCACCACG
CCAGGGCACA CGCCGGACGC GGTGCTCAAG CAAATCCAGA AGGACAAGCA CCTGGGCGCC
TGGAACGTGT ACGCCGCGCT GTATGGCTCT GCGGAGCAGG TTGAAGTGAA CTGGAAAATC
ATCACCGAGA CCATCAAGCG CTCTGGCAAG GGCACGCTCA TCACGCAGGA AGAAGCCGGC
GACCGCCAGC CTTTCAAGTA CCGTGCGCAA TTGATGTCGG GCGTGCCCAA CCTGCAGGAA
TTCGGCCTGT ACAACTGGCG CGGGGGCGGC GGCTCGATGT GGTTTGCCCC GGTCAGCCAG
GCGCGCGGCG GCGAATGCGA GAAGCAAGTC AAGCTGGCCA AGACCATCCT GAACAAGCAC
GGCCTGGACT ACGTGGGCGA ATTCATCGTC GGCTGGCGCG ACATGCACCA TGTGATCGAC
GTTTTGTTCG ACCGCACCAG CGAAGAAGAA ACCAGGCGCG CCAACGCCTG CTTCAACGAA
TTGCTCGACG AGTTTGAAAA AGAAGGTTAC GCCGTGTACC GCGTCAACAC CGCCTTTCAG
GAACGCGTGG CCAACAGCTA TGGCCCGGTC AAGCGTGACG TGGAGCGCAA GATCAAGCGC
GCGCTGGACC CGAACGGCAT TTTGTCTCCG GGCAAGTCCG GCATCCGTAT CTGA
|
|---|
| Protein sequence | MTKSKYLALP KGVSENRFDA AIKKFTAAVG ADHVLTSAEH LAPYTKVMMA VETAKHHPSA
VIMATSVEDV QAVLKVCNEY KIPVWTISTG RNFGYGSAAP VERGQIVLDL KKMNKIIHID
PELCTALVEP GVTYQMLYDY IEENKLPLML SFPAPSAIAG PLGNTMDRGV GYTPYGEHFL
MQCGMEVVMA NGDVLRTGMG GVKGDKAWQV FKWGYGPTLD GMFTQSNYGI CTKMGFWLMP
KPPVFKPFEI QYENEADIGE IVELLRPLRI AQIIPNAVVI AGVLWEASTC NTRRSDYLTT
PGHTPDAVLK QIQKDKHLGA WNVYAALYGS AEQVEVNWKI ITETIKRSGK GTLITQEEAG
DRQPFKYRAQ LMSGVPNLQE FGLYNWRGGG GSMWFAPVSQ ARGGECEKQV KLAKTILNKH
GLDYVGEFIV GWRDMHHVID VLFDRTSEEE TRRANACFNE LLDEFEKEGY AVYRVNTAFQ
ERVANSYGPV KRDVERKIKR ALDPNGILSP GKSGIRI
|
|---|
| |