| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3835 |
|---|
| Symbol | |
|---|
| ID | 4687810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 4091930 |
|---|
| End bp | 4093381 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639836853 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_984052 |
|---|
| Protein GI | 121606723 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATA TCCAGATGCT GATTGGCGGC GAACACCGCA CTGCTTCCAA CGGCGCCACC
TTTGAGCGCC GCAACCCACT GGACCAGACT GTGGCCACAC GCGCGCCGGC GGCCACGGCA
GCCGACGCTG TTGCGGCGGT TGAAGCGGCG TCCAGGGCCT TCCCGGCCTG GGCGGCCATG
GGGCCTGGCG AGCGCCGGGC ACTGCTGATG AAGGCCGCGC AGGCACTTGA AGCCAAAGGC
GAGGCCTTTG CGGCGGCGAT GGCAGGCGAA ACCGGCGCCT CAGGCATGTG GGCCGGCTTC
AACGTGCACC TGGCCGCTGG CATGCTGCTG GAAGCCGCCT CGCTGACCAC GCACATCAAT
GGCGAAGTGA TTCCGTCCGA TGTGCCGGGC AGCCTGGCCA TGGCGGTGCG CCAGCCAGCC
GGCGTGGTGC TGGGCATCGC CCCCTGGAAT GCGCCGGTGA TTCTGGCGGT GCGCGCCATT
GCCACGCCGC TGGCCTGCGG CAACACCGTG GTGCTTAAAG GCTCGGAACT GTGCCCGGCG
ACGCATGGCC TGATCATCGA GGCGCTGCAA GATGCCGGTC TGCCGCCAGG CGTGATGAAC
TTCATCACCA ATGCACCGGC CGATGCCGGC GCCGTGGTGG AGGCCATGGT GGCGCACCCG
GCGGTGCGCC GCGTGAACTT CACCGGCTCC ACCCACGTCG GCAAGATCAT TGCGCAAACC
TGCGCCAAGT ACCTCAAGCC GGTGGTTCTG GAGCTGGGCG GCAAGGCGCC AATGGTGATT
CTGGACGACG CCGACGTCGA CGCGGCTGTG GCGGCCGCCG CCTTCGGAGC CTTTGCCAAT
TCGGGCCAGA TCTGCATGTC CACCGAGCGC ATCGTGGTCG ATGAAACAGT GGCCGATGAA
TTCGTGGCCA AGTTCACGGC CAAGGCGCAG AGCCTGCCGC TGGGCGATCC GCGCAAAGGC
CCGGTGGTGC TGGGCTCGGT GGTGGACATG AACACCGTGA CGCGCTGCAA CGCGCTGATC
GACGATGCAC TGGCCAAGGG CGCCCAACTG CTCTGCGGGG GCAAGGCGCA GAACACGCTG
ATGCCGGCCA CACTGCTGGA CCATGTCACG CCCGACATGC TGATCTTCCG CCAGGAATCG
TTCGCGCCGG TCAAGGCCAT CGTGCGCGTC AAGGGCGTGG AAGCAGCCAT TGCCACCGCC
AACGACAACG AGTTTGGCCT GGCATCGGCG GTGTTTGGCC GCGACATTGC ACGCGCCTGG
CAAGTCGCTT CGCGCATTGA GGCTGGCATT TGCCACATCA ATGGCCCGAC CGTGCATGAC
GAAGCGCAAA TGCCGTTTGG CGGCGTGAAG AACTCCGGCT ACGGCCACTT CGGCGGCAAG
GCCGGCATCG ACGCCTTCAC CGAGTTGCGC TGGATCACGG TGCAAACCAC GCCGCGTCAC
TATCCGTTTT AA
|
|---|
| Protein sequence | MNDIQMLIGG EHRTASNGAT FERRNPLDQT VATRAPAATA ADAVAAVEAA SRAFPAWAAM
GPGERRALLM KAAQALEAKG EAFAAAMAGE TGASGMWAGF NVHLAAGMLL EAASLTTHIN
GEVIPSDVPG SLAMAVRQPA GVVLGIAPWN APVILAVRAI ATPLACGNTV VLKGSELCPA
THGLIIEALQ DAGLPPGVMN FITNAPADAG AVVEAMVAHP AVRRVNFTGS THVGKIIAQT
CAKYLKPVVL ELGGKAPMVI LDDADVDAAV AAAAFGAFAN SGQICMSTER IVVDETVADE
FVAKFTAKAQ SLPLGDPRKG PVVLGSVVDM NTVTRCNALI DDALAKGAQL LCGGKAQNTL
MPATLLDHVT PDMLIFRQES FAPVKAIVRV KGVEAAIATA NDNEFGLASA VFGRDIARAW
QVASRIEAGI CHINGPTVHD EAQMPFGGVK NSGYGHFGGK AGIDAFTELR WITVQTTPRH
YPF
|
|---|
| |