| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3830 |
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| Symbol | |
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| ID | 4687757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4087011 |
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| End bp | 4088105 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836848 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_984047 |
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| Protein GI | 121606718 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.592217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAGTTC CTGATCCCCT CGCCCTGAGT CCGGCGCCGC TGGCGGCTGT CCGGCGTCCG
TCCCGCCCGT CAGCCCATAT TCGCCGCCTG AACGCCCTCG GGCGCTTTCT GGTGGTGATT
CTGCTCACCT ACCTGGGGCT GCTCGCGGTC ACGTTTTTCA TCGGCCGCGT GATTCCGGTC
GATCCGGTGC TGGCGATGGT CGGCGATAAC GCGCCGCCGC ATGTGGTGGC ACGGGCGCGC
GAGGAAATGG GACTGAACAA GCCGGTTTAC ACGCAGTTCT ACATCTACCT GCGCAAGGTG
CTGAGCGGCG ACTTCGGCAC CTCGGTGCTG ACCGCCAACC CGGTGATGCA GGACATCCGC
CGCGCCTTTC CGGCGACGAT GGAGCTGGCC AGCCTGGGGA TTCTGTTCGG CGCCGGGCTC
GGCGTGCCGC TGGGCGTGTG GGCGGCGGTG CGGCGCGGCA AGCTGGTGGA CCAGGTGGTT
CGCATCATCG GGCTGGTCGG ATATTCGGTG CCGATTTTCT GGCTCGGGCT GATGGCGCTG
CTGGTGTTTT ATGCCAAGCT GGGCTGGGTC GGCGGGCCGG GGCGCATCGA CGTGGCCTAT
GAATTCACGC TGGTGCCCGT CACCGGCCTG CTGCTGCTGG ACACGGCGAT GGCCGGCGAG
TGGGAAGCCT TTGGCAACGC GCTGTCGCAT TTGATCTTGC CGGCGTCGCT GCTGGGCTAC
TTTTCCATGG CCTACATCAG CCGCATGACG CGCTCCTTCA TGCTCAATGA ACTGGCTCAG
GAATACGTGA TTGCCGCGCG CGCCAAGGGC CTGTCGGAAG CGCGCATCAT CTGGCGCCAC
GCGCTGCGCA ACGCGATGGT GCCGCTGGTC ACGGTGATTG CGCTGTCGTA CGCCGGGCTG
CTCGAAGGCT CGGTGCTGAC CGAAACCGTG TTTGCCTGGC CGGGGCTGGG CCTCTACATC
ACCAACTCGC TGCAGAACGC CGACATGAAC GCGGTGCTGG GCGGCACGAT TGTGGTGGGC
TCGATCTTCA TCGGCCTCAA TCTGCTGTCC GACCTGCTCT ACACCCTGCT GGACCCGAGG
ACGCGCACGC GATGA
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| Protein sequence | MAVPDPLALS PAPLAAVRRP SRPSAHIRRL NALGRFLVVI LLTYLGLLAV TFFIGRVIPV
DPVLAMVGDN APPHVVARAR EEMGLNKPVY TQFYIYLRKV LSGDFGTSVL TANPVMQDIR
RAFPATMELA SLGILFGAGL GVPLGVWAAV RRGKLVDQVV RIIGLVGYSV PIFWLGLMAL
LVFYAKLGWV GGPGRIDVAY EFTLVPVTGL LLLDTAMAGE WEAFGNALSH LILPASLLGY
FSMAYISRMT RSFMLNELAQ EYVIAARAKG LSEARIIWRH ALRNAMVPLV TVIALSYAGL
LEGSVLTETV FAWPGLGLYI TNSLQNADMN AVLGGTIVVG SIFIGLNLLS DLLYTLLDPR
TRTR
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