Gene Pnap_3810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3810 
Symbol 
ID4686792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4062960 
End bp4063799 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content72% 
IMG OID639836828 
ProductHpcH/HpaI aldolase 
Protein accessionYP_984027 
Protein GI121606698 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG ACCTACCGCA GACCTACCTG TTCGTGCCCG GCAACCGCCC CGAGCGCTTT 
GCCAAGGCGC TGGCCTCGGG CGCCGACCGC ATCATCCTGG ACCTGGAAGA CGCCGTGGCG
CCTGGCGACA AGGCTGCAGC ACGCGCCGCG ATTGCCGAAT GGATGGCCAG CGCCGGCCAA
GCACAAGGCA AGGTGCTGAT CCGCATCAAC GACGCCGCCA CGCCCTGGCA CGCCGACGAC
CTGGCGCTGG CGGGCAGCGT GCAGGCGCTG TGCGTCATGC TGCCCAAATG CGAGGCCGCC
GCCCAGATTT CGGAAGTGCT GGCCCAACTG GCCGCCAACG CGACCGTGCT GCCGCTGATC
GAGACCGCAC GCGGCATGCT GGCCCTGCCG GGCATCGCTA GCGCGCCCGG CGTGGCCCGG
CTGGCCTTCG GCGCGCTCGA CTACATGGCC GACCTGGACA TTCCGGCGGA CAGCCTGGCG
CTCGATGTTG CGGCGTCGCA GATCGCCGTC GCCTCGCGCG CAGCCGGCCT GGCGTCGCCG
CTGGCAGGCG TCACGCCCGC GCTGGATGCC GCCCAAGTGA CCGACGACAT GCGGCATGCG
CGCAGCCTGG GCTTCGGCGC CAAGATGTGC ATTCACCCCG CGCAGGTCGC CGCCGTGCGC
GCCGCGCTGG CGCCCAGCGC CGAAGAGCTG GCGTGGGCGC ATCGCGTGCT GCAGGCCTGC
CAAGCCTCGG GCGCCGGCGC TTTCCAGCTC GACGGAAAAA TGGTGGACCG GCCGGTGGTC
CTGAAAGCCC AGCGCATCGC GGCACAAGCC GCCCGCACTG GCTCACCCCT CCTCCCCTAA
 
Protein sequence
MSDDLPQTYL FVPGNRPERF AKALASGADR IILDLEDAVA PGDKAAARAA IAEWMASAGQ 
AQGKVLIRIN DAATPWHADD LALAGSVQAL CVMLPKCEAA AQISEVLAQL AANATVLPLI
ETARGMLALP GIASAPGVAR LAFGALDYMA DLDIPADSLA LDVAASQIAV ASRAAGLASP
LAGVTPALDA AQVTDDMRHA RSLGFGAKMC IHPAQVAAVR AALAPSAEEL AWAHRVLQAC
QASGAGAFQL DGKMVDRPVV LKAQRIAAQA ARTGSPLLP