Gene Pnap_3808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3808 
Symbol 
ID4686784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4060897 
End bp4061754 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID639836826 
Producthypothetical protein 
Protein accessionYP_984025 
Protein GI121606696 
COG category[S] Function unknown 
COG ID[COG3777] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC AAGACTGGAC CGGCCGCAGC GAGACGGTAG AAGACATTGC CACGGCCACG 
CCGTATGCCG CCTTGAGCGC CACGCTCGAC TGGCCGGCCA CGCCGGGCCA GGAGCGCCCC
GCTCCCGGCA CGCCGCTGCC CAGCCTGTGG CACTGGCTGT ACTTTTTGCC GATCCACCGG
CAGTCCGACA TCGGGCCGGA CGGCCACGCC CGGCGCGGCG GATTCATGCC GCCGGTGCCG
CTGCCGCGCC GCATGTGGGC GGGCAGCGAC TTCAGCTTCC ACGAGCCGCT GCGCATCGGC
GACACGCTGA GCCGGACCTC GACGATTGCC GAGGTGAAGG AAAAATCGGG CCGCACCGGC
AGCCTGATTT TTGTGAAAGT GCGGCACGAA ATCCGCCGCA ACGGCAGCCC GGACGTGGCG
CTGACCGAGC ACCACAACAT CGTTTACCGC GCCGCGCCCC AGCCCGGCGA CGTGAGCCCG
CCGCCGCAGG CCGCGCCCGA GGCATCGGCC TGGGAGCGGC GCATCATTCC CGACGACGTG
CTGCTGTTTC GCTACTCGGC GCTGACCTTC AACGGTCACC GCATCCACTA CGACCGCAAG
TACGTCACCG AAGTCGAAGG CTATCCGGGC CTGATCGTTC ACGGCCCGCT GATTGCCACG
CTGCTGATGG ACCTGCTGCG CCGCCAGCAG CCTGATGCAA AAGTGCTTCG CTTCGAGTTC
AAGGCGGTGC GGCCGACCTT TGACATCCAC CCTTTTTCCG TCCACGGCCA GCCTTCGCCC
GACGGCAAGA CCGTGCATCT GTGGGGCCGC GACCATGAAG GCTGGCTGAC GATGGACGCC
ACCGCAACGC TCGCCTGA
 
Protein sequence
MNLQDWTGRS ETVEDIATAT PYAALSATLD WPATPGQERP APGTPLPSLW HWLYFLPIHR 
QSDIGPDGHA RRGGFMPPVP LPRRMWAGSD FSFHEPLRIG DTLSRTSTIA EVKEKSGRTG
SLIFVKVRHE IRRNGSPDVA LTEHHNIVYR AAPQPGDVSP PPQAAPEASA WERRIIPDDV
LLFRYSALTF NGHRIHYDRK YVTEVEGYPG LIVHGPLIAT LLMDLLRRQQ PDAKVLRFEF
KAVRPTFDIH PFSVHGQPSP DGKTVHLWGR DHEGWLTMDA TATLA