Gene Pnap_3726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3726 
Symbol 
ID4686785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3967045 
End bp3968538 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content62% 
IMG OID639836744 
Productmethyltransferase type 12 
Protein accessionYP_983943 
Protein GI121606614 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0228434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0246269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAT CACGCTGCAA CAACTTACGC GTTGTTGCAT CCCGGCCCCG CCGACTCCTA 
AGGACGCCTG ACACCGTGCA TCCCATCCGC CCCATCGATC CCGTCATCAC GTTCCGCAAC
AGCCAGGGGG AAGCCGTGCG CGGCACGCTG ACCAATGTCC AGCGCCGTTC GCTGGTGATG
GAAATCTACA ACCCGTACTC GATTGTGCAG GTCAGCGAAG TGCTCAGCGA GCTCACCATC
CGTTCGGGCG AGCGCAGCAT TTACAAAGGC AAGGCGGTGG TCACCAGCTT GCTCAATACC
GGGCTGATGG CGATGGTGTC GGCGGTGCTG ATTGACGAAT GGAACGAACT GGCGGCCATC
GGGCGCGACG GCAAATCCGT TGGCGACGAG GCGCGCTCAT TCGTGCAGGG GTGGAACACC
CGTTTCAACG TGCGTCGGCA ATACCAGGTG GTGGTCAGCG AAATGCGCGC CTATTTTTCC
GAGATCACGC GCTGGATCGA CCAGGCGGAC ATCAATACCG GATTGCCGCG CGCCGGCGAC
GGACGCGTGC GTGAAGACGT TTTCTTTGAT CTGGCCTCGC CGTTGCTGGA AAAGGGACGC
GAATACCTGC TGTGGTTTGA AGACGAAGCC GGGCGCGTCG ATCCGGAAAT CGCGCCGGTG
CACCGCAGCT TCGCCCAGGC GGCGATTCAT CCGCTGATCC TGCGCGCGCC TTTTGTGTAC
CGCACTTTCG CCAAGCCGCT GGGCTATGCG GGCGACTATG AAATGGTCAA CCAGATCCTG
GGCGACCCGC GCCAAGGGCC CAGCACCTAC TTTCAGCTGG TCAACTACAT GTTTCTGCAG
GCGGGCGTGG CCGTGGCGCA CCGCAACCGG ATCGATATCC TGTGCGACCG CCTGGACGAG
CTGGCGGCCG CTGCCGTGAA GGCCGGCCGG CCCATGCGCG TACTGAACGT GGGCTGCGGG
CCGGCGGCGG AAATCGAGCG CTTTGTGCGC AACAACCCGC ATTCGGACAT GCTCGAATTC
GTGCTGGTCG ATTTCAGCGA GGAAACCCTG AAGTACACCG CCCAGCGCCT CGAAGAGGCC
AGCCGGCCGA CCAGGCGCAA GCTCAACGTC ACACTGCAGC ACGAATCGGT GAACCAGCTG
CTCAAGCGCG CCGTGCGCGC GCAACGCGCC GCCCCCGAGG AAAGTTTTGA CTACGTCTAT
TGCGCCGGCC TGTTCGATTA CCTGACGGAC AAGGTCTGCA CCCGGCTCAT CGAGTATTTC
ATCTCGCGCT CCCGGCCCGG CGGCCGCATC CTGGTCACCA ATGTGCATTC GAGCAATCCG
GAACGCAACT GGATGGAGCA CTTCCTGGAG TGGTACCTGA TCTACCGCGA CGAGGCGGGC
ATGCTGAACG CCCTTCCGCA GGGCATCGAG AATGCCAGAA CCTACACAGA CCCGATTGGC
GTGAACGTCT TTGTCGAGGC CATCGTCAGC GCCGACGCCA GCAACACGGC ATGA
 
Protein sequence
MSQSRCNNLR VVASRPRRLL RTPDTVHPIR PIDPVITFRN SQGEAVRGTL TNVQRRSLVM 
EIYNPYSIVQ VSEVLSELTI RSGERSIYKG KAVVTSLLNT GLMAMVSAVL IDEWNELAAI
GRDGKSVGDE ARSFVQGWNT RFNVRRQYQV VVSEMRAYFS EITRWIDQAD INTGLPRAGD
GRVREDVFFD LASPLLEKGR EYLLWFEDEA GRVDPEIAPV HRSFAQAAIH PLILRAPFVY
RTFAKPLGYA GDYEMVNQIL GDPRQGPSTY FQLVNYMFLQ AGVAVAHRNR IDILCDRLDE
LAAAAVKAGR PMRVLNVGCG PAAEIERFVR NNPHSDMLEF VLVDFSEETL KYTAQRLEEA
SRPTRRKLNV TLQHESVNQL LKRAVRAQRA APEESFDYVY CAGLFDYLTD KVCTRLIEYF
ISRSRPGGRI LVTNVHSSNP ERNWMEHFLE WYLIYRDEAG MLNALPQGIE NARTYTDPIG
VNVFVEAIVS ADASNTA