| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3684 |
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| Symbol | |
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| ID | 4686298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3921089 |
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| End bp | 3921838 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639836702 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_983901 |
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| Protein GI | 121606572 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAA TCCGCCCCAC CCGCACCGAG CCGCTGCGCG CCGTGCTGTT CGACGCCTAC
GGCACGCTGT TCGATGTGTA CAGCGTCGGG CTGCTGGCCG AGCAGCTGTT TCCCGGACGC
GGGCAGGCGC TGGGCGTGAT GTGGCGCGAC AAGCAGATCG AATACACGCA CCTCGTGAGC
ACCAGCAGCG GCGGCGCGCA CTACCAGCCG TTCTGGGAAC TGACCCGCGC CGCGCTCGTT
TATGCTATTA AAAGAATAGC TGGTGATGCC CGTACTGATT GCGCAAACGG CCAGTTTGAT
GCCAAAGTCG AGCAACTGAT GAACCAGTAC CACCATCTGT CGGCCTTTCC CGAAAACCGC
GAGGTGCTGC AGGCGCTGAA AAGCCGGGGC GTGGTCACCG GCATTTTGTC CAACGGCGAC
CCGGCCATGC TCGCCGTGGC CGTCAAGTCG GCCGGGCTGG GCGATTTGCT CGACCATGTC
ATCAGCGTCG ATGCGATCCG CAAGTACAAG ACCCATCCCG ACGCCTACCA ACTCGGCCTG
CAAGCCACCG GCCTGCCGGC GCGGCAGATC GCCTTCGTCA GCTGCAACAG CTGGGACGCG
CTGGCCGCGA CCTGGTTCGG CTACCAGACG CTCTGGGTCA ACCGCAACCG CCTGCCGTTC
GAGACGCTGG GCACCCAGCC GACGTACACC GGAGTCAGCC TGCGCGATGT GCTGGCGCTG
CCCGGCCTGG GGCAGGGCGC GCCCGCATGA
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| Protein sequence | MEKIRPTRTE PLRAVLFDAY GTLFDVYSVG LLAEQLFPGR GQALGVMWRD KQIEYTHLVS
TSSGGAHYQP FWELTRAALV YAIKRIAGDA RTDCANGQFD AKVEQLMNQY HHLSAFPENR
EVLQALKSRG VVTGILSNGD PAMLAVAVKS AGLGDLLDHV ISVDAIRKYK THPDAYQLGL
QATGLPARQI AFVSCNSWDA LAATWFGYQT LWVNRNRLPF ETLGTQPTYT GVSLRDVLAL
PGLGQGAPA
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