| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3616 |
|---|
| Symbol | |
|---|
| ID | 4689296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3846894 |
|---|
| End bp | 3847646 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639836629 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_983833 |
|---|
| Protein GI | 121606504 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4340] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.285892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAATA TTGTCACTGT TCAAAAACCC GCCGACCAGG CCCTGCGCCA GGACGGATTG
AGCCTGCTCT TGCCGGCCGG CTTCACCACC AGCCTGAAGC TGCAAACGCC GCAATGGACG
CAGGACTGGG ACGGCCTGGC CGACTCCTGG AACCGGCTGC CGCCCGACGC GCACCTGAAG
GACGGCGGCC ACTACCGGCG CCGGCGCCAC GCCTGCTTTG TGCAGGAACT CGCCAGCGGC
GCGCTTGAGC AGGTGGCGCA CCGCGCGCAC TGGCAGCCGA CCGACTACAA CGCGCTGCAC
GGCGGCTTCG AGCGCTGGTT CGACCCGGTC GAGCCGGCCG TCGCCCAGGC GCCGGCCTGG
CTGGAGCTGC TGGCCAGCCT GGGCCAGCTG TTTGCCCGGG TCAAGCCGGT GCCGCGCTGG
TACATCGAGG CGCACCAGTT CCGCATCGAC ACCACCGAAG GCGTGGGCCG GCCGACGCCC
GAGGGCGCGC ACCGCGACGG CGTGGACTTC GTGGTGGTGC TGCTGGTAGC GCGGCGCGGC
GTCAAGGGCG GCGAAACCCG CGTGTTCGAT GCCCACGGCC CCGACGGCGT GCGCTTTTTG
ATGCAGGAGC CGCTGACGGC GCTGCTGCTG GACGACGAGC GGGTGATCCA CGAAACCACG
CCGATCTTCC CCGCCGACGG CCAGGACCGG CAGGGCGGCG TGCGCGACAC GCTGGTGCTG
ACCTACCGGG CAGACGGCTT TCAGGCGCCC TGA
|
|---|
| Protein sequence | MFNIVTVQKP ADQALRQDGL SLLLPAGFTT SLKLQTPQWT QDWDGLADSW NRLPPDAHLK
DGGHYRRRRH ACFVQELASG ALEQVAHRAH WQPTDYNALH GGFERWFDPV EPAVAQAPAW
LELLASLGQL FARVKPVPRW YIEAHQFRID TTEGVGRPTP EGAHRDGVDF VVVLLVARRG
VKGGETRVFD AHGPDGVRFL MQEPLTALLL DDERVIHETT PIFPADGQDR QGGVRDTLVL
TYRADGFQAP
|
|---|
| |