| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3607 |
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| Symbol | |
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| ID | 4690214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3836500 |
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| End bp | 3838446 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639836620 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_983824 |
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| Protein GI | 121606495 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.385801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCA CATTCCCCCA ATTGCTGCTC AAGCATGCCG CCGAGCGCCC TGCGGCAGCG
GCCATGCGCG AGAAAGAATA CGGCATCTGG CAGGCGCACA GCTGGTCAGC CCTGGCCGGA
CTGGTCGCGC AGCTGGCCGC AGGGCTGAAC CAGGCGGGCC TGCGGCGCGG CGAGCACATG
GTGGTGATTG GCGCCAACCG CCCGCGCCTG TATGCGACCA TGCTGGCGGT GCAGTCGCTG
GGCGCGATTC CGGTGCCGCT GTACCAGGAC GCGGTCGGCG CCGAATGCGT CTTTCCGCTG
AACAACGCCG AAGTGCGCTT TGCCATGGTC GAGGACCAGG AGCAGGTGGA CAAGCTGGTC
GAGATCCGCG ACCGTTGCCC GCAAATCTCC AACATCTACT ACGACGACCC GCGCGGCCTG
CGCAAGTACA GCGAGCCCGG CCTTGATTCG CTCGATGCGC TGATCGAGTC GGGCCAAGCC
TTTGTCGCCA AAAACCCGCA GTGGTTTGCC GCTGAAGTCG CCAAGGTCCA GCCGAACGAC
GTGGCGGCGA TGTTCTTCAC CTCCGGCACC ACCGGCAATC CCAAGGGCGT GGTGCATACC
CACAGCACGC TGCTCGACCG CGCCACGGCT GGCGCCGAAT TCGACAAGCT GACCTCCGCC
GAGGAAGTGC TGGCCTACCT GCCGCCGGCC TGGATCGGCC AGAACATCTT CAGCTACGCC
CAGTGGCTGG CCTGCGGCTA TGTGGTCAAC TGCCCCGAGT CGGCCGGCAC CGTGACGATT
GACCTGAAGG AAATCGGCCC GACCTACTAC TTTGCGCCGC CGCGCATTTT TGAAGGCCTG
CTGACCAGCG TGATGATCCG CATGGAAGAC GCCGGCACGC TCAAGCGCAA GATGTTCGAA
GCCTGCATGA ACGTCGCCCG GCGCGTCGGC CCGGCGCTCA TGAACGGCGA GCCGGTCGGC
GCGCTGGACC GCATCAAATA CGCTCTCGGC AACCTGCTCG TGTACGGCCC GCTGCGCAAC
AACCTGGGCT TCAGCCGGGT GCGCGTGGCC TATACCGCCG GCGAGGCGAT TGGCCCGGAC
CTGTTCACGT TTTACCGCTC GATCGGCATC AACCTCAAGC AGCTCTACGG CTCGACCGAG
ACCGCCGTGT TCGTCTGCCT GCAGCCCGAC AACCAGGCGC GCGCCGACAC CGTGGGCGTG
CCGATTCGCG GCGTGCAAAT CAAGGTCGCC GGCAACGGCG AAATCATGGT CAAGTCGGCC
GGGCTGCTCA AGGAATACTA CAAAAACCCG ACGGCCACGG CCGAGGTGCT GACCGCCGAC
GGCTGGTACC ACACCAGCGA CGCCGGCTTC CTGGACGTAC ACGGCCACCT GAAGATCATC
GACCGCGTGA AGGACGTGGG CCGCATCAAG GGCGGGCCAA ACGACGGCGC CATGTTCGCG
CCCAAGTATG TCGAGAACAA GCTCAAGTTC TTCCCCTTCA TCAAGGAAGT CGTGGCGCTG
GGCGACGGGC GCGAGCGCGT CTGCGTGATG ATCAACATCG ACTTCGATGC CGTGGGCAAC
TGGGCCGAGC GGCGCAACCT GCCCTACGCC GGCTACACCG ACCTGGCGCA AAAGCCCGAG
GTCTATCAGC TCATGAAGGA ATGCGTCGAG AAGGTCAATG CCGACCTGGC CAGCGACCTG
CTGCTGGCCG GCAGCCAGGT CAGCCGCTTC CTGATCCTGC ACAAGGAACT CGATGCCGAC
GATGGCGAAC TGACGCGGAC CAACAAGGTG CGGCGCGGCT TTATCGCCGA CAAGTACGGC
GTGCTGGTCG AGGCGCTGTA TGCCGGCAAG ACCGAGCAGT ACATCGAGAC CGTCGTCAAG
TTCGAGGACG GCCGCACCGG CAGCGTCAGC GCCACGCTCA AGCTGTCGGA CGCCAAAACC
TTTTCCCCGG TCAAGGCCGC TGCTTGA
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| Protein sequence | MQTTFPQLLL KHAAERPAAA AMREKEYGIW QAHSWSALAG LVAQLAAGLN QAGLRRGEHM
VVIGANRPRL YATMLAVQSL GAIPVPLYQD AVGAECVFPL NNAEVRFAMV EDQEQVDKLV
EIRDRCPQIS NIYYDDPRGL RKYSEPGLDS LDALIESGQA FVAKNPQWFA AEVAKVQPND
VAAMFFTSGT TGNPKGVVHT HSTLLDRATA GAEFDKLTSA EEVLAYLPPA WIGQNIFSYA
QWLACGYVVN CPESAGTVTI DLKEIGPTYY FAPPRIFEGL LTSVMIRMED AGTLKRKMFE
ACMNVARRVG PALMNGEPVG ALDRIKYALG NLLVYGPLRN NLGFSRVRVA YTAGEAIGPD
LFTFYRSIGI NLKQLYGSTE TAVFVCLQPD NQARADTVGV PIRGVQIKVA GNGEIMVKSA
GLLKEYYKNP TATAEVLTAD GWYHTSDAGF LDVHGHLKII DRVKDVGRIK GGPNDGAMFA
PKYVENKLKF FPFIKEVVAL GDGRERVCVM INIDFDAVGN WAERRNLPYA GYTDLAQKPE
VYQLMKECVE KVNADLASDL LLAGSQVSRF LILHKELDAD DGELTRTNKV RRGFIADKYG
VLVEALYAGK TEQYIETVVK FEDGRTGSVS ATLKLSDAKT FSPVKAAA
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