| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3606 |
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| Symbol | |
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| ID | 4690177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3835164 |
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| End bp | 3836351 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836619 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_983823 |
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| Protein GI | 121606494 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.316629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCATT GCACGCCTTC CCTGCCTGAT GTTTCCGGCC ACACCACCCC TGGAACACTG
TCAAGGCGGG GGGTTCTGGG CGCCCTTGCG GCACTGCCAC TGGCGATTCA CGCACCGCTT
CGCGCCCAAG ACACCGGCCC GCTGAAAATC TGCCAGTCCA CCGCGCTGAC CGGGCCGCTT
GCCGACCTTG GCGGGCCTTT GCACCAGGGC GCCAAAACCT ATTTTTCGGC GCTCAACGCC
AAAGGCGGCG TCAACGGCCG TCCGATTGAA TTGACCGTTG CCGACGATGG CTACGAGGTG
GCGCGCTCAC TGGCCAATGT GAAGGGGTTT ATCGAGGACC GCAACTGCTT TGCAATTTTC
AACTGCTTCG GAACCCCCAT GGTCGAGGCC ATGCTGCCCC AGGTGATCGA GTCGGGCATT
CCGTTTTTCG CACCCCTGAC CGGCGCCTTG CTGGCGCACC CCAAGAACGT GCGCAGCGTG
TTCAATATCC GCGCCAGCTA TGCCGACGAA ACCGAGCACC TGGTGCAGCA TCTGGCCACC
ATCGGCATCA AGCGCATCGC CATCGTGTAC CAGAACAACG CCTTCGGCCA GGATGTCGCC
AACGCGGCCA AGCAGTTCAT CGCCATCCAC AAACTCACGG AAACGGCCAC GGCCACGGTT
GAAAACAACT CGTCGGATGC GGCCGCCGCA GCCACCAAGA TTGCCGCTTC CCAGCCCGAA
GCGGTGATCA TGGGCCTGGC GGGCAAGCCC ACGGTCGAAT TTGTCAAGGC CATCCGCCAG
CAGCGCAAGG GACTGCAGCT CTACGCCCTG TCGGTCATGG GCGCGGCAGC CACCCTCAAG
GCCATGGGCG CTGACGCCAC CGGCATCACC GTGTCGCAGG TCATGCCTTT GCCGGCCAAC
AACGGGCTGC CGCTGGCGCG TGAATTCCAG CAGGCCTGGA AGGCCGGCGG CGCGACGCTG
GAGGCTTCAC ACCTGGCGTT CGAAGGCTAT GTCAATGCGA AGGTGTTTGC CGAAGCACTG
CGCCGGGCCG GACGCAATCC CACGCGCAGC GGCTTTATCG ACAGCACCTG GGCCATGAAG
CGTTATGACC TCGGCGGCTT TGAAGTGAGC TTTACCGACT CCGCAAAAAG TGCCTCGCGC
TTCGTGGAAC TCAACATGGT TTCGCGCGAC GGGCGCCTGA TCCGATAA
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| Protein sequence | MTHCTPSLPD VSGHTTPGTL SRRGVLGALA ALPLAIHAPL RAQDTGPLKI CQSTALTGPL
ADLGGPLHQG AKTYFSALNA KGGVNGRPIE LTVADDGYEV ARSLANVKGF IEDRNCFAIF
NCFGTPMVEA MLPQVIESGI PFFAPLTGAL LAHPKNVRSV FNIRASYADE TEHLVQHLAT
IGIKRIAIVY QNNAFGQDVA NAAKQFIAIH KLTETATATV ENNSSDAAAA ATKIAASQPE
AVIMGLAGKP TVEFVKAIRQ QRKGLQLYAL SVMGAAATLK AMGADATGIT VSQVMPLPAN
NGLPLAREFQ QAWKAGGATL EASHLAFEGY VNAKVFAEAL RRAGRNPTRS GFIDSTWAMK
RYDLGGFEVS FTDSAKSASR FVELNMVSRD GRLIR
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