Gene Pnap_3596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3596 
Symbol 
ID4689243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3820620 
End bp3821177 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content70% 
IMG OID639836609 
Productputative transmembrane protein 
Protein accessionYP_983813 
Protein GI121606484 
COG category[S] Function unknown 
COG ID[COG5488] Integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTTTGG CCGGGCGCCG GTGTATTTTC TGGCCGATGG CCTGCCCCTC GACAAACGCC 
AGCCCACCCG CCGCAAGCCC CGCTGAAGAC CCGCCCCGGT GGCGCTTGAA ACGGCGCTGC
GCGTTGGCGC CCGGCCAGTT GCTGCAGGCC TATGCCGCGC TGGCGGTGTT CAGCGCAGCG
ATTGCCCTGC CCTTCGGTTG GCACGGCCTG TGGCTGATTC CGCTGTGGAG CCTGCTGGAG
ATCACCGTGG CCGGGGCGCT GTTCGTGGTG TACATGCTGC ATGCGGCCGA TGGCGAGCAG
ATCAGCTTCA GCCCCGAAGG CCAGTTGGCC ATCGAGGTGG TGCGCGGCCT GGACACACGG
CACTACCGCA TGAATCCGGC CTGGGCGCAC CTGGAGCGGG GCGGCCCGCG CAAGGACCGC
CTGTGGCTGT GCTGCAGCCC GCTACGGGTC GAGGTGGCCA CGCAACTCGG CGCCGGTGAA
AAGCGCCGGG TGGAACGCGA GTTGAAGCAG GCGCTGGCGG CCCGGCAGGC CTGCGGCGCG
ATGGCGGCGA CGCCCTGA
 
Protein sequence
MLLAGRRCIF WPMACPSTNA SPPAASPAED PPRWRLKRRC ALAPGQLLQA YAALAVFSAA 
IALPFGWHGL WLIPLWSLLE ITVAGALFVV YMLHAADGEQ ISFSPEGQLA IEVVRGLDTR
HYRMNPAWAH LERGGPRKDR LWLCCSPLRV EVATQLGAGE KRRVERELKQ ALAARQACGA
MAATP