Gene Pnap_3575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3575 
Symbol 
ID4689245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3798759 
End bp3799784 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content65% 
IMG OID639836588 
ProductCheB methylesterase 
Protein accessionYP_983792 
Protein GI121606463 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.779005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACT CACAATTGCC AAACCGCGAC ATCGTGGTCA TCGGGGCGTC GGCCGGCGGG 
GTCGAGGCGT TGCGGGGCTT CTTTGCGGCC TTGCCCGCCG ACCTCGATGC CGCCATCCTG
GTGGTGCTGC ACATTCCGGC CGACACACCG AGCCAGCTCG ACCAGGTGCT GGCGAATGCG
ACGCCGCTTC CGGTCGTGAT TGCCGAAGAT GGCCAGCCGA TTGAGCACGG GCGTGTTTAT
GTCGCCTCGG CCGACCGGCA CCTCATGGTC ACGCCGCAAG GCATCCGGCT CAGCCGGGGG
CCGAAGGAAG TCCGCGCCAG GCCGTCGGTC GATGTGCTGT TTCGCTCGGC CGCCGCAGCG
TTTGGCTCGC GCGTCATCGG CGTGGTCCTG AGCGGCGCGC TCGACGACGG CACGGCCGGG
CTCTGGGCCA TCAAGGACCA CCAGGGCGCC ACGCTGGTGC AGATTCCTTC GCAGGCCATG
CATCCCTCCA TGCCCGAAAG CGCCATTGCG CATGTCCAGG TAGATTTTGT CGGCACGGTC
GAAGCGCTGG CCGACAAGGT CAGGGAACTG GTCGGCACCG CCGCGCCCGT GGTGGCGGCC
AGCGCTTTGA GCCTGCAGCG CGCCATGGAA AACGACATCG CCATGCAAGG CAATGCACTC
AAGGCCGGCA TCATGAACCT GGGCAAGGTT TCCCCCTACA CCTGCCCCGA TTGCCATGGC
GTGCTGATGC AGATCGAAGA AGGCACGATT GTTCGTTTTC GCTGCCACAC CGGCCATGCG
TTTTCACTCA AGACCCTCAT GGCCGAGATC AACGACGCCA TCGACCAAAG TCTGTGGGCG
ACCTTGCGCG CCGTCGAAGA GCGGGTGATG CTGCTGCGCC AGATGGAACA GTTGGCGCTT
CATTCCGGCG CGAACGACAC GGCAGCGCAA TGGCGCAAGC AGGCCGATGA CTCGGAACAG
CGGCTCCAGC CGCTGCGCGA CCTGGTGCTT GATCCGGGCT TTTTCGGGCA TGCGTCCAAG
AACTGA
 
Protein sequence
MENSQLPNRD IVVIGASAGG VEALRGFFAA LPADLDAAIL VVLHIPADTP SQLDQVLANA 
TPLPVVIAED GQPIEHGRVY VASADRHLMV TPQGIRLSRG PKEVRARPSV DVLFRSAAAA
FGSRVIGVVL SGALDDGTAG LWAIKDHQGA TLVQIPSQAM HPSMPESAIA HVQVDFVGTV
EALADKVREL VGTAAPVVAA SALSLQRAME NDIAMQGNAL KAGIMNLGKV SPYTCPDCHG
VLMQIEEGTI VRFRCHTGHA FSLKTLMAEI NDAIDQSLWA TLRAVEERVM LLRQMEQLAL
HSGANDTAAQ WRKQADDSEQ RLQPLRDLVL DPGFFGHASK N