| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3538 |
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| Symbol | |
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| ID | 4686911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3757843 |
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| End bp | 3759045 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836552 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_983756 |
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| Protein GI | 121606427 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTGA GTCGCAATCT TGCCAACCCA GCCTTTGACG GAAAACCCAT GAAAATTGAA
AGTGTGCACG GAGTCGAGTT TACCTACCCA ACGCGCCGGT CTTCTGACAG CGCCGGACAT
TCACACCCTG GCCCCGAAGG CCTGGGCAAG CTGGCGCTGC TCACCATCAC CACCGACGAA
GGGCATTGCG GTTATGCGTT TGCGCCCCCC GAGGTGATCC GCCCGCATGT GCTGGATGCT
TTTGTGCGCA AGGTGCTGAT CGGGCAAAAC CCGTTTCAGC GCGAGCATCT CTGGCAGGCG
CTGGAACACT GGCAGCGCGG CAGCGCCGGG CAACTGACGG ACCGCGCCTT GGCCGCTGTC
GATCAGGCGC TGTGGGACTT GGCCGGGCGG GCGCTGGGCC AGCCCGTGTA CCGCCTGATT
GGCGGCTACC GCGACAAGGT GCAGGCTTAT GGCAGCACCA TGTGCGGCGA TGAACTCAAG
GGCGGTCTGT CCACGCCTGA AGAATATGGG GCCTTTGCCG AGACGCTGGT GGCGCGCGGC
TACAAGGCCA TCAAGCTGCA CACCTGGATG CCGCCCGTGC GGTTTGCGCC AGATACCGGC
ATGGACATCA AGGCCTGCGC TGCCGTGCGT GAAGCCGTTG GTCCCCACAT CCCGCTGATG
CTCGACGGCT ACCACAACTA CAGCCGCACT GACGCGCTAA CCATTGGCCG CGCGCTGGAA
AAGCTCAACT TCACCTGGTT CGAGGAAATG ATGAACGAGC AGAGCATGGC GTCCTACGCC
TGGCTGGCAG GCCAGCTCGA CATTCCCATC GTCGGGCCGG AAAGCCTGTC CGGCAAGCAC
CACAGCCGCG CCGACTGGGT GGCGGCCGGC GCCTGCGATA TCTTGCGCGC CGGCGTGCCC
GGCGTGGGCG GCATTTCGCC GACCCTGAAA GTGGCGCACC TGGCCGAATC CTTCGGCATG
AACTGCGAGG TGCATGGCAA CGGCGCGGCC AACCTGGCGG TGTGCGCCGC CATCAAGAAC
TGCCGCTGGT ATGAGCGCGG CTTGCTGCAC CCCTTCCTCG ACTATGACGA AGTGCCTACC
TACCTCAACA GCTTGGCCGA CCCGATGGAC GCCAACGGCG ACGTGCATTT GTCGCAACTC
CCCGGCCTGG GTGAGGACAT CAACTTTGAT TACATTGAGG CGCACGCATG CGCCCGCTAC
TGA
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| Protein sequence | MTVSRNLANP AFDGKPMKIE SVHGVEFTYP TRRSSDSAGH SHPGPEGLGK LALLTITTDE
GHCGYAFAPP EVIRPHVLDA FVRKVLIGQN PFQREHLWQA LEHWQRGSAG QLTDRALAAV
DQALWDLAGR ALGQPVYRLI GGYRDKVQAY GSTMCGDELK GGLSTPEEYG AFAETLVARG
YKAIKLHTWM PPVRFAPDTG MDIKACAAVR EAVGPHIPLM LDGYHNYSRT DALTIGRALE
KLNFTWFEEM MNEQSMASYA WLAGQLDIPI VGPESLSGKH HSRADWVAAG ACDILRAGVP
GVGGISPTLK VAHLAESFGM NCEVHGNGAA NLAVCAAIKN CRWYERGLLH PFLDYDEVPT
YLNSLADPMD ANGDVHLSQL PGLGEDINFD YIEAHACARY
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