| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3440 |
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| Symbol | |
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| ID | 4688841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3649010 |
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| End bp | 3650176 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836454 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_983658 |
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| Protein GI | 121606329 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA TCGACATCAT CGAATCGACC CGGCCCATCA AGTCGGACAT CCGCAACGCC
TACATCGACT TCTCGAAGAT GACGCTCAGC CTCGTCGCCG TCGTGACCGA TGTGGTGCGT
GACGGCAAGC CGGTCATCGG CTACGGCTTC AACTCCAACG GCCGCTACGG ACAGGGCCAG
TTGATCCGCG AACGCTTTCG CCCGCGCGTG CTGGAGGCCG AGGCTGGGGC CTTACTGGAT
GAGACCGGCA ACAACCTCGA CCCGCACAAG ATCTGGGCCT GCATGATGTC CAACGAAAAG
CCGGGCGGCC ACGGCGAGCG CTCGGTGGCG GTCGGCACGC TCGACATGGC GATCTGGGAC
GCCACCGCCA AGATCGCCGG GCAGCCGCTG CACGACATGC TGGCGCAGCG CTACGGCAAC
GGCGTGGCCA ACCCGAAAGT GTTCGTCTAT GCCGCCGGCG GCTACTACCA CCCCGGCAAG
GGCATTCCGG GCCTGCTGGG CGAGATGCAG AGCTACCTGG ACCGGGGCTA CTCGGTGGTG
AAGATGAAGA TCGGCGGCGC CCCGCTGGCC GAGGACATGC AGCGCATCGA GGCGGTGCTG
AAAATGCTCC AGCCCGGCCA GCAACTGGCG GTCGATGCCA ACGGCCGCTT CGACCTGGCG
ACGGCGGTCG CCTACGGCAA GGCGATGGCG CAGTACCCGC TGTTCTGGTA CGAGGAAGCC
GGCGACCCGC TGGACTACGA GCTGCAGGCG CGCCTCGGCG AAAGCTACAC CGGCCCCATG
GCCACGGGCG AGAACCTGTT CTCGATGCAG GACGCGCGCA ACCTGATCCG CTACGGCGGC
ATGCACAAGG ACCGCGACTG GCTGCAGTTC GACTGCGCGC TGAGCTACGG GCTGGTCGAG
TATTTGCGCA CGCTGGACAT GCTGAAGGAC TACGGCTGGT CGCCCAGCCG CTGCGTGCCG
CACGGCGGGC ACCAGATGTC GCTGGCGATT GCCGCCGGCC TGGGCCTGGG CGGCAATGAG
TCCTACCCCG ACCTGTTCCA GCCCTACGGC GGTTTCCCCG ACGGCGTCAA GGTGGAAAAC
GGCTACGTGA CGCTGCCGCC GCTGCCCGGC ATCGGCTTTG AGGGCAAGGC CGACCTGTAT
GCGGAAATGA AGGCATTGAC CGCCTGA
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| Protein sequence | MKIIDIIEST RPIKSDIRNA YIDFSKMTLS LVAVVTDVVR DGKPVIGYGF NSNGRYGQGQ
LIRERFRPRV LEAEAGALLD ETGNNLDPHK IWACMMSNEK PGGHGERSVA VGTLDMAIWD
ATAKIAGQPL HDMLAQRYGN GVANPKVFVY AAGGYYHPGK GIPGLLGEMQ SYLDRGYSVV
KMKIGGAPLA EDMQRIEAVL KMLQPGQQLA VDANGRFDLA TAVAYGKAMA QYPLFWYEEA
GDPLDYELQA RLGESYTGPM ATGENLFSMQ DARNLIRYGG MHKDRDWLQF DCALSYGLVE
YLRTLDMLKD YGWSPSRCVP HGGHQMSLAI AAGLGLGGNE SYPDLFQPYG GFPDGVKVEN
GYVTLPPLPG IGFEGKADLY AEMKALTA
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