| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3431 |
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| Symbol | |
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| ID | 4689195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3639774 |
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| End bp | 3641252 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639836445 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_983649 |
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| Protein GI | 121606320 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.875541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.885014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGA CCCAGCCCAC CCGGCATGAG CCGATCTACC AGCGCCTGGC CTCGCATTAC
CGGGACGTGA TCCATGCCGG CTCGCTGGCG CCCGGCGACC GCATGCCCAG CCTGCGCACG
CTGATGCGCC AGCATGCGGT GAGCCTGTCC ACGGTGCTGC AGTTCAGCCG GCAGCTGGAA
AGCGAAGGCT GGCTGGAGGC GCGGCCGCGC TCGGGCTACT TCGTGCGCCA TCCGCGCCGC
AGCGCACTGG CGCGGGTGGC CGAACCGCGG CTGGATGTGG CGCCCGATCC TGCGCAATAT
GTCGGCATCC ATGCCCGAGT GTCGGAATTC GTGGCGCGCC GCCGGCTCCA GCCGAGCAAG
ATCGATTTTT CGGCAGCGCG TTGCGCACCC GAGCTGTACC CCGGCGAGGC GCTGAAAAAT
GCTGCCATTC GGGCGCTTCG GCGTCAGCCC GATCTGCTGG TCAGCCCTTC GCAGGCCAGA
GGCTCGCGGC ACTTGCGCTC GGTGCTGGCC AAGCGCGCGA TCAATATCGG GCTGGCCCTG
TCGTCCGAGG ACATCCAGAT CACCAACGGC TGCATCGAGG CCCTGAACAT TGCACTGCGC
GCGGTGGCCC AACCGGGCGA CACGATTGCA GTCGAATCAC CGACCTTCTA CGGCCTGCTT
CAAATCCTGG AAAGCCTGAA CATGCGGGCG CTGGAAATAC CCACCAGCCC CGAAACCGGC
ATGTCCACCG GGGCGCTGGA ACTGGCGCTG CAGACCTATC CGGACATCAA GGCGGTCGTC
GTGGTGCCGC ACCTGCAAAA TCCGCTGGGC AGCATGATGC CGGCAGCGCA CAAGCAGCAG
TTGCTGCGGC TGTGCCAACA CCATGACATC GCGCTGATCG AGGACGATTC CTACAGCGAA
CTGGCCAACC GCAGCGATGC CCAGGCCGCA TCGATCCGGG CGATCAAGTC CTGGGACACG
GGCGGCCAGG TGATCTATTG CGCCTCGCTG CACAAGACGC TGGCGCCGGG CCTGCGCCTG
GGCTGGATGG CGGCGGGTCG CTGGCAGGCG CGGGTGGAAA TGCTGAAGTA CGCGCAAACC
CGCAGCAACG AGGAGCTGCC ACAGCTGGCA GCCGCCGAAT TCATGGCCTC CAGCCAGTAT
GACCGGCACC TGCGCACGCT GCGCGGCAAA CTCGATGTAC AGCGCGCCAA GACCGCCGAG
GCGATTGCCA CCTATTTCCC GGCTGGCACG CGCATGAACC TGCCCGATGG CGGGCTGACG
CTGTGGGTCG AGCTGCCCGG CCAGCTTTCG TCCGGAGCCG TGTTCGATGC GGCCCTGGAC
GCGCAGATCC TGGTGGCGCC CGGCTGGCTG TTTTCCAACT CCCGGCGTTT TGACCACTTT
GTGCGCCTCA ACTGCGGCTG GCCCTATGAC GCTGTCCTGG ACCGGGGTTT GCGCGGACTG
GGCGAGATCG TCGGCAGGCT GGCCCATCGG CTGGAATGA
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| Protein sequence | MTMTQPTRHE PIYQRLASHY RDVIHAGSLA PGDRMPSLRT LMRQHAVSLS TVLQFSRQLE
SEGWLEARPR SGYFVRHPRR SALARVAEPR LDVAPDPAQY VGIHARVSEF VARRRLQPSK
IDFSAARCAP ELYPGEALKN AAIRALRRQP DLLVSPSQAR GSRHLRSVLA KRAINIGLAL
SSEDIQITNG CIEALNIALR AVAQPGDTIA VESPTFYGLL QILESLNMRA LEIPTSPETG
MSTGALELAL QTYPDIKAVV VVPHLQNPLG SMMPAAHKQQ LLRLCQHHDI ALIEDDSYSE
LANRSDAQAA SIRAIKSWDT GGQVIYCASL HKTLAPGLRL GWMAAGRWQA RVEMLKYAQT
RSNEELPQLA AAEFMASSQY DRHLRTLRGK LDVQRAKTAE AIATYFPAGT RMNLPDGGLT
LWVELPGQLS SGAVFDAALD AQILVAPGWL FSNSRRFDHF VRLNCGWPYD AVLDRGLRGL
GEIVGRLAHR LE
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