| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3362 |
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| Symbol | |
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| ID | 4690145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3561099 |
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| End bp | 3561854 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639836375 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_983580 |
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| Protein GI | 121606251 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CGGTACGACT CGCCAAACGC CTTGCCGAAA TGCTGGCTTG CTCACGCCGC
GAGGCCGAAC AGTACATCGA GGGCGGCTTT GTCACTGTCG ATGGCGTGGT GGTGGAAGAA
CCCCAGTTCC GCGTGCAGAA CCAGGCCATC GCGCTGTCGC CCGACGCCAG CCTGCTGGCG
CTGACGCCGG TAACCATTCT GCTGCACAAG CCGGCGGGCT ACGAGGCCAG CGACACGCCG
GGCGCAAACC CCGCCTCCGC CGGCAAGACC GCCGCCCAGC TGCTGACCGC CGCCAACCAT
GCCTCCGACG ACCGTTCGGG CATCCGGCCG CTGAAAAAGC ATTTCTCCAG CTCCGAACTG
CTCACGCCGC TGGCGACTGC GGCCAGCGGC CTGGTGGTCT TTTCGGGTGA CTGGCGCGTG
GCGCGCAAGC TGCGCGAAGA CGCCCGGGTG CTGGAGCATG AGGTGGTGGT CGAGGTCAGC
GGCGAGATCA AGCCCGGCGG CCTGGAGCGC CTGAACCGCA TCGACCACGG CTTTACCTAC
CGGGGCGCAT TGCTGCCGCC GGCCAAGGTC AGCTGGCAAA GCGAAACCCG GCTGCGCTTT
GCGCTCAAGG GCGAGGTGCC GGGCCAGATT GCCTACATGT GCGACAGCGT CGGGCTCAAG
ATTGAGGCGA TGAAGCGGCT GCGCGTCGGC CGCATGCCGC TCAGCCAGCT GCAGCCCGGG
CAGTGGCGGT ATTTGATGCC CTACGAGCGG TTCTAA
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| Protein sequence | MTEPVRLAKR LAEMLACSRR EAEQYIEGGF VTVDGVVVEE PQFRVQNQAI ALSPDASLLA
LTPVTILLHK PAGYEASDTP GANPASAGKT AAQLLTAANH ASDDRSGIRP LKKHFSSSEL
LTPLATAASG LVVFSGDWRV ARKLREDARV LEHEVVVEVS GEIKPGGLER LNRIDHGFTY
RGALLPPAKV SWQSETRLRF ALKGEVPGQI AYMCDSVGLK IEAMKRLRVG RMPLSQLQPG
QWRYLMPYER F
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