Gene Pnap_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3352 
Symbol 
ID4689505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3553419 
End bp3553949 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content52% 
IMG OID639836365 
Productputative CheW protein 
Protein accessionYP_983570 
Protein GI121606241 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.318478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACA GACAAGCCCT TAAAGAGCTA CAGACACGGC TGGCAGAGCG ATTGCAGCTT 
GCCAAGATGC AAGGCATTGC ACCCTCGTGG CTGGCCGTTG AAGCCGGTAG CAAAAAATAC
CTTTTCCCCC TGGCTCAATC CGGGGAAATT TTCCCCTGGA TCGGCATCCA GCCGGTTTCC
TATACCCAGT TCTGGTTTTT GGGTGTGGCC GGCTTGCGTG GCGGTCTTTA TGGCGTGGTC
GATCTGGCCG GTTTTGTGAG CGGCCAGCCA TCCGTTTCGA GAAATGAACT TGCCCGTACA
GAGTCGAGGC TTGTTTCTTT CAATAGCGCG CTTGAGGTTA ATTGTGTCTT GCTGATCGAC
AAGCTAGCAG GATTGCGAAA ACAGGATGCC TTCATCGATT TCTCGGTGCG AGCGCCCGAT
GCACCTGCAT TTTTTGGAAA CCAGTACGTT GATATCAATG GTGCAAGCTG GCAGGAAATC
AACCTGCAGT TGCTTGCACA ACAAGTTCAT TTTTTGACCA TAGCTGCTTA G
 
Protein sequence
MANRQALKEL QTRLAERLQL AKMQGIAPSW LAVEAGSKKY LFPLAQSGEI FPWIGIQPVS 
YTQFWFLGVA GLRGGLYGVV DLAGFVSGQP SVSRNELART ESRLVSFNSA LEVNCVLLID
KLAGLRKQDA FIDFSVRAPD APAFFGNQYV DINGASWQEI NLQLLAQQVH FLTIAA