| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3336 |
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| Symbol | |
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| ID | 4689357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3533439 |
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| End bp | 3534383 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639836349 |
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| Product | threonine dehydratase |
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| Protein accession | YP_983554 |
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| Protein GI | 121606225 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.175409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTCA ACCGCTATCA AATCGAGAGC TGCCAGCACA CGTTCAGCAA GCGCTACAGC
CACTTTATCC GTCGAACTCC GCTCTGGAAA CTGCCTGGCG GGGCGCTGGG CGTGGACTGC
GCCGAAGTCT GGCTCAAGCT GGAGCATCTG CAGACCGGCG GCAGCTTCAA GGCGCGCGGC
ATGCTCAACC GCTTGCTGTC CAACCCGATT CCGCCCAGCG GCGTGATCGT GGCGTCGGGC
GGCAACGCGG GCATTGCCAC GGCGGCTGCG GCCAAGGAAC TGGGCGTGCC TTGCGAAGTC
TTCGTTCCCG AAATCTCCAG CCCGGCCAAG CGCGCCCGGC TCGCCGCCCT GGGCGCTCGC
GTCATGGTAG GCGGCGCGGC CTATGCCGAT GCGCTGCGGG CCTGCCTGGC GCGCCAGCAG
GAAACCGGGG CGCTGCTGAC CCATGCCTAC GACCAGCCCG AAGTGCTGGT GGGCGCCGGC
ACGATGGCGC TGGAAATCGA GCAGCAGGGC GGCCTGCCGG ATTCGGTGCT GGTCAGCGTG
GGCGGCGGCG GCCTGATCGG CGGCGTGGCC AACTGGTTCG GGCACCGCAG CCGCGTGGTG
GCGCTGGAGC CCGAGCTGGC CCCCAGCCTG TTCCGGGCGC GTCAAGCCGG CCGGCCGGTG
GACGTGGAGG TCGGCGGCAT CGCGGCCGAT TCGCTCGGTG CCCGGCGCAT CGGCAGCCTG
GCGTGGGACG TGACGCAGGC GCAGGTGCGC GATGCGCTGC TGCTGAGCGA CGAATCCATC
CGGACGGCGC AGCTGTGGCT GTGGCAGGAA CTCAAGCTGG CCGTCGAGCC CGCCGCCGCC
TTGCCGCTGG CCGCGCTGCA CAGCCGGCGT TATGTGCCGC GTGCGGACGA AACCGTCTGC
CTGATCATTT GCGGCGCCAA CGTCGATCCG GCCAGCCTGA ACTGA
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| Protein sequence | MTVNRYQIES CQHTFSKRYS HFIRRTPLWK LPGGALGVDC AEVWLKLEHL QTGGSFKARG
MLNRLLSNPI PPSGVIVASG GNAGIATAAA AKELGVPCEV FVPEISSPAK RARLAALGAR
VMVGGAAYAD ALRACLARQQ ETGALLTHAY DQPEVLVGAG TMALEIEQQG GLPDSVLVSV
GGGGLIGGVA NWFGHRSRVV ALEPELAPSL FRARQAGRPV DVEVGGIAAD SLGARRIGSL
AWDVTQAQVR DALLLSDESI RTAQLWLWQE LKLAVEPAAA LPLAALHSRR YVPRADETVC
LIICGANVDP ASLN
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