Gene Pnap_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3246 
Symbol 
ID4686713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3448192 
End bp3449178 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content68% 
IMG OID639836259 
Producthypothetical protein 
Protein accessionYP_983465 
Protein GI121606136 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGC TTTCACAAGT TGTACAGACG CCGGCCTCCT CAACCCCTGC CGAAAGCGCG 
GACCAGTTGC TGCGCCGGCT CGAATGGACA GTGCTGCGCC GCCTCGACGG CCTGCTGCAG
GGCGACTACC GCACGCTGCT GCGCGGCACC GGCATGGACC TGGCCGACCT GCGCGAATAC
CAGTACCACG ACGACGTGCG GCATATCGAC TGGAACGTGA CGGCGCGGCT GCAGCAGCCG
CATGTGCGCG TGTTCACCGA AGACCGCGAG ATGAGCGCCT GGTTCCTGCT CGACCTGAGC
CCGTCGATGG ATTTCGGCTC CAGCGAGCAA CGCAAGCGCC ACGTATTAAC CGACTTCGTC
GCCGTGCTGG CACGCATGCT GACGAAGCAC GGCAACCGCG TGGGTGCGCT GCTTTATGGC
GCCGGCGTCG ATGCGGCCAT CCCGGCGCGC GGCGGGCGCC AGCATGTGCT GCACCTGCTG
CACACCCTGC GCACGCGCCC CGAAGCCGCC AGCGCCGGCG CGACCCGCCT GCATGAACTG
CTGGAGTCGG CCGCCAAGCT GGTGCGCCGG CGCTCCACGC TGTTCGTGGT GTCCGACTTC
ATCACCGAAG CCGGCTGGGA AAAGCCGCTG GGACTGCTGG CCCAGCGGCA CGAGGTCGTC
GCCGTGCGGC TGCTCGACCC GCTGGAGCTG GAATTGCCCG ACCTGGGCCT GATTCCGATC
ACGGACGCCG AAACCGGCGA GCAGTTGCTC GTCGATACCC ATGACGCCGG CTTTCGCAGG
CGCTTTGCGC GCATCGCGGC CCAGCGCGAA GCCGAGTTGC GCCAAGCCCT GGCGCGGGCC
GGCGTGGACA CGCTCGAACT CTCGACCGAT GACGACCTGG CAGGCGCCAT CATGCGTTTT
ACCGACCTGC GCAAACAGCG CAGCCGTTTA TCCGGTGCCC ATGCGGCGGC AGGCAGGCTG
CCGGCCCACC TGGCGCACGC CGGCTGA
 
Protein sequence
MPKLSQVVQT PASSTPAESA DQLLRRLEWT VLRRLDGLLQ GDYRTLLRGT GMDLADLREY 
QYHDDVRHID WNVTARLQQP HVRVFTEDRE MSAWFLLDLS PSMDFGSSEQ RKRHVLTDFV
AVLARMLTKH GNRVGALLYG AGVDAAIPAR GGRQHVLHLL HTLRTRPEAA SAGATRLHEL
LESAAKLVRR RSTLFVVSDF ITEAGWEKPL GLLAQRHEVV AVRLLDPLEL ELPDLGLIPI
TDAETGEQLL VDTHDAGFRR RFARIAAQRE AELRQALARA GVDTLELSTD DDLAGAIMRF
TDLRKQRSRL SGAHAAAGRL PAHLAHAG