| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3173 |
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| Symbol | |
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| ID | 4687380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3370434 |
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| End bp | 3371858 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639836185 |
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| Product | transposase, IS605 OrfB |
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| Protein accession | YP_983392 |
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| Protein GI | 121606063 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.184045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCT TTCAATCCGG CGTGCGTTTT TTGGCACTCC CCAATCCTCA GCAAGCTGCA
ACGCTGCGCC GATGGATTGG TTGTCAGCGT CACATTTTCA ACGCCAAGGT CGAAGAAGAC
CGGCTCTTTG TCGCGCAGCG CCGAATGATG CTTCGAGAAG ATGCGGACGC CGTGATTCGC
ACGCCACTCG ATCGGCTTTA TGCCCAGTTC AAGGACGACC ATCTAACGCC CTGGCTTAGC
GACGTGCCCA GTCAGGTGCT TCGCGAAGGC ACCTACCGCT GGTTCAATAC CAAGCAGCGC
CAGCTCAAGG GATTGGCCAA AGCGCCAAGA AAGCGCAGCC AGCGCGACTT CAACTCCGTC
ATGCTGTGCA GCGATCTGTT CGAGTTCACC GAAGATGGAC GCCTCATTCT TGGTACCGCC
AAGTTTCCGG TGGGGAGGCT GCACTTCAAT GCGCACCGGC CTTTTGGTCA TCCGAAGATG
ATCACCCTGC GCGAATCGGC CGGGCGCTGG TTTGTCAGCT TCAGCTACGA GCAATCGGTG
GATACTGTGG AGAACGCTGG CAAGGACAGC CAATTGCTCC GCGAGCCGCA CGAACTTGCT
TATGAACTCG GCTTGCTGGG AGAAAAAGAA GTGGCGGCGC TCACGCTTGG CATTGACCGT
AACGTCGCTG ACAACTGTGT TGCCACCAGC CGTGGCGACT TTTTCTTGCC TGAAGCGGTC
ATGCTTGAGC GTATTGCGCG CAAGGCGCGT GGCGCCAAGC GTCAGCAAAA GCGCCTGGCG
CGCACGAAAA AAGGTTCGGC CAATCGTCGC AAAGCGGCCG CGCGCGTTGC ACGAAAATAC
GGCTACAAGG CCGAGGTTCT GCGCGACTTC GCGCACAAGA CGAGCCTGGC ACTGAGCGAT
TCGGGGGCCA AACTGATTGT TTTCGAGGAT CTAAAAATCC AGAACATGAC TCGAAGGCCC
AAGGCCAAAC AAGACAATTC CGGTCGGTGG CTTCGCAACG GCAGGGCAGC CAAGGCAGGA
CTGAACCGTT CAATTTTATC TTCGGCCTGG GGCCGTATCA GGGTGATGAC CCAGTACAAG
GCGGCGCGGC GCAATGTTCT GGTTGGCTTC GTTCGTCCCC ATCATTCAAG TCAGGAGTGT
TCCCTTTGCG GGCACACTCA TCCAGAAAAC CGGCATGGCG CCGCGTTTCT CTGTCAACGC
TGTGGCTACG CGCAGCATGC AGACCTCAAT GCCGCGACAA ATATTGCCGC GCGCGGGGTA
ACGCTGTTGC GCTCGGGCGA ACTTGAAACG CCGCCAAAAG CCAAGAAGCG TGTCGCTGTC
AAGCGAAGAA CAAATTCAGG GTCGGTGCGA CCCGGTGTGT CTGTGGAGCA TTTACAAGAC
GCGGCTTCTG GCCTTGCGCC AGGAACCCCG CGCACGATGC TGTGA
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| Protein sequence | MSSFQSGVRF LALPNPQQAA TLRRWIGCQR HIFNAKVEED RLFVAQRRMM LREDADAVIR
TPLDRLYAQF KDDHLTPWLS DVPSQVLREG TYRWFNTKQR QLKGLAKAPR KRSQRDFNSV
MLCSDLFEFT EDGRLILGTA KFPVGRLHFN AHRPFGHPKM ITLRESAGRW FVSFSYEQSV
DTVENAGKDS QLLREPHELA YELGLLGEKE VAALTLGIDR NVADNCVATS RGDFFLPEAV
MLERIARKAR GAKRQQKRLA RTKKGSANRR KAAARVARKY GYKAEVLRDF AHKTSLALSD
SGAKLIVFED LKIQNMTRRP KAKQDNSGRW LRNGRAAKAG LNRSILSSAW GRIRVMTQYK
AARRNVLVGF VRPHHSSQEC SLCGHTHPEN RHGAAFLCQR CGYAQHADLN AATNIAARGV
TLLRSGELET PPKAKKRVAV KRRTNSGSVR PGVSVEHLQD AASGLAPGTP RTML
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