Gene Pnap_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3163 
Symbol 
ID4687012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3359768 
End bp3360424 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID639836175 
Producthypothetical protein 
Protein accessionYP_983382 
Protein GI121606053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.541529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TACTGCTCTC CAGCGCCCTG ATGGCCGCGT GCGCAGGCGC CTTTGCCGGC 
AGCCTGGTCG TCTCCGTGGT GGACAAGGAA GGCAAGCCGG TGCCGAATGC GGTGGTGGTC
GTGCTGCCGG ACAACAAGTC GGTGCTGCCC AAAACGCCGC TGCCGGTGCA GGCCACCATC
ACCCAGGAAA AAATGCAGTT CATGCCGGGC GTCACCCTGG TGCCGGTGGG CGCAAAACTC
AGTTTCATCA ACAACGATCC GTGGGACCAC CATGTGCGCT CATCGCCTGC CGGCATGGGC
CAGTTCAATG CGTCAAAAGC CGGCTTTGAA CTGCGGCTGG AAGGCAAATC AGACGGCAAG
GCGCCCAAGG CCGTGGACGT CACGCTCGAC AAGGCGGGCG CCCTGAGCGC CACGCTGCTG
GGCTGCTTCA TTCACGGCTC GATGCGCGGC TATGTCTATG CGAGCGAATC GCCGTGGGCC
GCCAAAACCA CAGCCGACGG CCTGGCAATG TTTGACGACC TGCCCGACGG CCCGGCCCAG
GTCCGGGTCT GGCAGGCCGA CCAGTTGCTG GACCTGCCGG TGCAAACCCA TACCGTCACG
GCCTCCCCCG GCAGAATAAG CGTGCAACTG AGCGTGGTGC CGCGCCGCCG GGTCTGA
 
Protein sequence
MKKLLLSSAL MAACAGAFAG SLVVSVVDKE GKPVPNAVVV VLPDNKSVLP KTPLPVQATI 
TQEKMQFMPG VTLVPVGAKL SFINNDPWDH HVRSSPAGMG QFNASKAGFE LRLEGKSDGK
APKAVDVTLD KAGALSATLL GCFIHGSMRG YVYASESPWA AKTTADGLAM FDDLPDGPAQ
VRVWQADQLL DLPVQTHTVT ASPGRISVQL SVVPRRRV