Gene Pnap_3148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3148 
Symbol 
ID4687124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3341965 
End bp3342975 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content64% 
IMG OID639836160 
Producthypothetical protein 
Protein accessionYP_983367 
Protein GI121606038 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTC CATCACTTCC CCGCCGCGCG GGCTTGCGCT CCCTGGCGCG CTGGTCCGCC 
CTTTGCCTGG GTCTTCTGGG CACCAGCTTT TCGGCGCAGG CTGACGCCCC TTTCCCGAAC
AAGCCCGTCA ACCTCGTCAC CGCCTTTGCC GCGGGCAGCG GCCCCGATGC CGTGCTGCGC
CAGGTGGCGG ACAAGCTGTC GAAACTATGG AATCAGCCTG TCCTCATCAC CAACCGGCCC
GGCGGCGGCG GTTTCATCGC CATCGAATCG ACGCGCCGCG CCGCGCCAGA CGGCTACACC
CTGCTGCAAC TCGACAGTGA ACACCTGGCC GCCCTGCCGC TGCTGTACAA GTCCAGGAAG
TTTGTCACGC TGGACAACTT CGACCCCGTT GCGCCGCTCT TTCGCACGCC GTTCCTGGTG
GCGGTGGCAA CCGACTCCAA ATGGCAGAGC ATGAAAGACC TGGTGGCTGC CGCCAAGGCC
GCACCGGGCA AGGTGAGCTA CGGGTCCTGG GGCGTTGGCA GTCCCGGGCA TCTGGGCGGC
GAGCAACTCG AACTGCTTGA GCAGCTTGAA ATGACCCATG TGGCTTACCG GGAAGTGTCC
CAGCTCTTCA CCTCGGTCGG CGCCGGCGAC ATTCAGTGGA GCATGGCCAG CATTCCATCG
AGCCAGGGCA TGTTCAAGGC CGGCAAGATC CGCTACCTGG CCGTCGCCGC GCCCAAACGC
ATTCCCCAGA TGCCGGAGGT TCCGACGGTG GCCGAGGCAG GCGGCCCAGC CGGCTTCGAG
GTGAACTCTT TTGTCTCGCT GGTGGCCCCG AAAGGCATTG CGGCCGATGT GGCCAACAAG
ATCAACGCCG ACGTTCTCAA GGTACTGGCA GACCCCGAAG TCAAGGCGCG CTTCAATACC
TTCGCTTTCG AGACCATCAC CTGGTCACCC GCCGAGATCC GCCGCAACGC CGATGCCAAG
GCCAAGGTGT ACGAACAACT GATCAAGCGC AAGAATATCA GCCTGGATTA A
 
Protein sequence
MNLPSLPRRA GLRSLARWSA LCLGLLGTSF SAQADAPFPN KPVNLVTAFA AGSGPDAVLR 
QVADKLSKLW NQPVLITNRP GGGGFIAIES TRRAAPDGYT LLQLDSEHLA ALPLLYKSRK
FVTLDNFDPV APLFRTPFLV AVATDSKWQS MKDLVAAAKA APGKVSYGSW GVGSPGHLGG
EQLELLEQLE MTHVAYREVS QLFTSVGAGD IQWSMASIPS SQGMFKAGKI RYLAVAAPKR
IPQMPEVPTV AEAGGPAGFE VNSFVSLVAP KGIAADVANK INADVLKVLA DPEVKARFNT
FAFETITWSP AEIRRNADAK AKVYEQLIKR KNISLD