| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3125 |
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| Symbol | |
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| ID | 4687152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3316222 |
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| End bp | 3317481 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639836137 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_983344 |
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| Protein GI | 121606015 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATT CAGCACTGAA GCTGCCGACG TTCTGGAAAA ACGTCACGAC CGTGCTTGGC
GGTACGGCGA TAGCCCAGAT CATTCCCATC GCCATGCTGC CACTGCTGAC GCGCATTGTG
CCGGCCGATC AACTCGGGGC TTATTTTGTC TGGCTGGGTG CAACATCCGT TTTAATTGTC
ATTGCCTCCG CCCGGTTGGA CATGGCAGTA TTTCAGGCAC AGAGCGAAGA GCAGGTCAGC
GGGATATTTC AAGCGGTGCT TGTTATTAGC GTGGGTGTTG GCGTCGCCGG ACTGCTCACC
GCAATGGCCT TTCAGCAATT TCCCGGCAAG TCTCTTGTGG ATGGCGTTGC GGGAAGATAT
TCAGTGGCAT GGGCCGTATA TGCGGTCGTC ATGGCCAACT GTCAGACCTT GCTGGCCGTC
TATGTGTACA GGGCTCAGTT CGAGCGCATG GCCTATGGGA AGGTGGTATT GGCCGGATCA
GTTGCATTTG CGCAATTGGC ACTCAGCCTG GCAGGCGCAG GACTTAATGG ACTTGTCTAT
GGGCAACTGA CGATGTCCTT CATCATCACG CTGGCTTTGA TGTACCGCGC AGGGCTTAGG
CCACTGTCAC TCCTGGCCAA AGTGAATATT GCCGGACTGA AGCAAACGCT GAAACGCTAC
TATCGTTTTC CGGTAATTGC CATGCCCTCC GATTTCATCA ATACCTTTTC CGATCAGATA
CCCCTTTTTC TCATTGCCAC CCGCTTCGGC GCGGGATCCG TTGCCCTATA TGCACTGAGC
CTGCGCATCA TCAACGGGCC GATAGGCTTG CTTGCCAATT CCATACTGGC GGTTTTCAAG
GAACAGGCCG GCCGGGATTT TCGCGAGAAA GGCAACTGCC TTGATGCCTA TCGCTACACT
TTTCGCTCAC TCCTGCTGAT GGCCATTATT CCCTTCACGC TTTTGTTTTT CTTTGGGGAG
CAGGCATTTG TTCTCGTCTT CGGTCAGGAC TGGTCAATGG CAGGTCGTTT TGCAGAAGTG
CTGGCCCCCA TGTATTTCAC GAAATTCATT GCCAGTCCCA TGAGTTACAC CCTGTACATC
GCCAACAAGC AAATACAGGA TTTAGGCTGG CAAATTGCTT TACTTGTCAT GACCTGGGCC
GCATTTTATT TAACCGGCAG CCTGATGAGT GCTGTTCAGA TGTATTCACT CGGCTACAGC
GCGTTGTACA TCATTTATTT GTTGATGTCA TACCGCGCCG CCTGTGGAGT CTGTTCATGA
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| Protein sequence | MNHSALKLPT FWKNVTTVLG GTAIAQIIPI AMLPLLTRIV PADQLGAYFV WLGATSVLIV
IASARLDMAV FQAQSEEQVS GIFQAVLVIS VGVGVAGLLT AMAFQQFPGK SLVDGVAGRY
SVAWAVYAVV MANCQTLLAV YVYRAQFERM AYGKVVLAGS VAFAQLALSL AGAGLNGLVY
GQLTMSFIIT LALMYRAGLR PLSLLAKVNI AGLKQTLKRY YRFPVIAMPS DFINTFSDQI
PLFLIATRFG AGSVALYALS LRIINGPIGL LANSILAVFK EQAGRDFREK GNCLDAYRYT
FRSLLLMAII PFTLLFFFGE QAFVLVFGQD WSMAGRFAEV LAPMYFTKFI ASPMSYTLYI
ANKQIQDLGW QIALLVMTWA AFYLTGSLMS AVQMYSLGYS ALYIIYLLMS YRAACGVCS
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