| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3050 |
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| Symbol | lysS |
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| ID | 4687535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3223068 |
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| End bp | 3224633 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639836063 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_983270 |
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| Protein GI | 121605941 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCC ACCCGACTTC TCCCGCAACC GGCAGCGTTG CCCCAGCCCA CCACGACGAA
AACCAGCTGA TGGTCGAGCG CCGGGAAAAA CTCGGCGCCC TGCGCAAGCA CCAGGCAGAC
GGCAAGGGCG TGGCTTTCCC GAACGACATC AAGCCCGGGC ATCGGGCCGA AGCGCTGTTT
GCGCAGTACA GCCACCTGAG CAATGAAGAG CTGGAGCCGC TGGCGGTCAA GGTGAGCGTG
GCCGGCCGCA TGATGCTCAA GCGCGTCATG GGCAAGGCGA GCTTTGCCAC GCTGCAGGAT
GCGTCGTTCG GCCCCACGGG TGGCCGCATC CAGCTCTACA TCAACAATGC CGGCGTCGGC
GAGGAAGTCC ATGCGGCTTT CAAGCACTGG GATCTGGGCG ACATCGTGGC GGCGACCGGC
CTGCTGTTCA GGACCAAGAC CGGCGAGTTG TCGATCCATG CCGACAGCAT CCGGCTGGTG
ACCAAGAGCC TGCGCCCGCT GCCCGACAAA TTCCACGGCA TGGCCGACCA GGAAGTCAAA
TACCGCCAGC GCTATGTCGA TTTGATCATG GACGAAGCCG CGCGCAAGCG CTTCATGGCG
CGCAGCAAGG CCGTCAGCGG CATTCGCGAG TTCATGGTGG CGAATGACTT CCTGGAAGTC
GAAACGCCGA TGCTGCATCC GATTCCGGGC GGCGCCAACG CCAAGCCGTT CAAGACCCAT
CACAACGCGC TGGACCAGGA AATGTACCTG CGCATTGCGC CCGAACTCTA CCTCAAGCGC
CTGATCGTCG GCGGTTTCGA ACGCGTGTTC GAGATCAACC GCAGCTACCG CAACGAAGGC
ATCAGCGTTC GCCACAATCC CGAGTTCACC ATGATGGAGT TCTACGCGGC CTGGTGGAAT
TACACCGATT TGATGACCTT CACCGAAGCG CTGATCCGCG ACGCAGCCCA GAAGGTCTGC
GGCTCGCTGC AACTGAGCTA CGCCGGCAAG CCGGTCGATC TGAGCCAGCC CTTTGAACGG
CTGACCATCC GCGAAGCCAT CCTCAAGCAT ACCGAGGCGG GCGAACAGGT GGACGACGCC
GTCTGGCTGA CGAATGCCCT TAAAAAGCTC GGGCTGAACG AGGAAAAAAA CCGCCTGTCC
GGCCGCTCGC TGGCCAGCCT GCAGGTGCTG TATTTTGAAG AGCTGGTTGA AGAAAAGCTC
TGGCAGCCGA CCTTCATCAT GGAGCACCCG ACCGAAATCT CGCCACTGGC TAGAGCCAAC
GACGAACGCC CGGAAGTCAC CGAGCGCTTT GAGCTTTACA TCACCGGCCG CGAATTCGGC
AACGGTTTCA GCGAACTGAA CGATGCCGAA GAACAGGCGG TGCGCTTCAA CGCACAGGTT
CATGCCAAGG ACAGCGGCGA CGATGAAGCC ATGTTCTACG ACCACGATTT CATTCGCGCC
CTTGAGTACG GCATGCCGCC GACCGGCGGC TGCGGCGTGG GCATCGACCG GCTGATGATG
CTGCTGACCG ACAGCCCAAG CATCCGCGAC GTGATTTTGT TCCCTGCACT GCGCCGGGAA
GCCTGA
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| Protein sequence | MSSHPTSPAT GSVAPAHHDE NQLMVERREK LGALRKHQAD GKGVAFPNDI KPGHRAEALF
AQYSHLSNEE LEPLAVKVSV AGRMMLKRVM GKASFATLQD ASFGPTGGRI QLYINNAGVG
EEVHAAFKHW DLGDIVAATG LLFRTKTGEL SIHADSIRLV TKSLRPLPDK FHGMADQEVK
YRQRYVDLIM DEAARKRFMA RSKAVSGIRE FMVANDFLEV ETPMLHPIPG GANAKPFKTH
HNALDQEMYL RIAPELYLKR LIVGGFERVF EINRSYRNEG ISVRHNPEFT MMEFYAAWWN
YTDLMTFTEA LIRDAAQKVC GSLQLSYAGK PVDLSQPFER LTIREAILKH TEAGEQVDDA
VWLTNALKKL GLNEEKNRLS GRSLASLQVL YFEELVEEKL WQPTFIMEHP TEISPLARAN
DERPEVTERF ELYITGREFG NGFSELNDAE EQAVRFNAQV HAKDSGDDEA MFYDHDFIRA
LEYGMPPTGG CGVGIDRLMM LLTDSPSIRD VILFPALRRE A
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