Gene Pnap_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3022 
Symbol 
ID4688638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3188888 
End bp3190600 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content58% 
IMG OID639836035 
Productband 7 protein 
Protein accessionYP_983242 
Protein GI121605913 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TGCTTGTCAA CATCGGCATT CCAGCGGGCC TGGTGCTTTT TCCGCTCCTG 
CTGATTGGAA TGGTCTTTGC CCGGCTTTAC CACCGTGCAA CCAAGGAGAC TGCATTTGTG
AGAACGGGCC TGGGCGGCCA GAAAGTCATC ATGGATGGCG GCGCCATCGT GCTGCCGGTA
TTTCATGAAA CCATTCCCGT CAACATGAAC ACCCTGAAGC TTGAGGTGTC GCGGCGCGAA
GAGCAAAGCC TGATTGCGCT GGACCGCATG CGCGTGGATG TCGCTGCGGC TTTTTTTGTA
CGCGTCAAGC AAACGGCGGA GTCCGTCAGC ACGGCCGCCC AGACACTGGG TCGCAAGACG
ATGGAGCCGG CAGCGCTCAA GACCCTGGTG GAAGACAAAT TCGTGGATGC GCTGCGCGCA
ACAGCCGCCA CCATGACCAT GCGGGAACTG CAGGACAAGC GCCGCGAATT CGTGCAGGCC
GTGCAAAACG CCGTGGCCGA AGACCTGGAA AAAAACGGGC TTGAACTGGA GTCCGTTTCG
CTGACCAGCA TGGACCAGAC GGCCAAGGAG TTCTTCAACC CGAGCAACGC TTTTGACGCC
GAAGGTCTGA CCCGGCTGAC CGAGGAAACG GAAAGCCGCC GCAAACAGCG CAATGACATC
GAGCAAGACA CGGAAGTGCA GGTGCGCACC AAAAATCTTG AGGCGGAAAG GGTCAAGCTG
AATATTTCCA AGGAACAGGA ATTTGCAACC CTGACCCAGC AGCAGGAAAT TTCCAACGCC
AAAGCGGACC AGACCGCAAC CATCGCGAAA ATCGAAGCAG AACGCCAGCG TGAAGCCGAG
GAAGTCCGGA TCAACGCCGA CCGCCTCGTC AAGGAGCGGC GCATCGAGGC GGACCGAACC
GTCAACAATG CAGAGATCGA CAAGAATCTT TCGGTGCAGA AAAAGCAGAT CGAGGCGGAC
CGCGAAACCA GGGTCAAGCA GGCCGAGCAG CGCCAGGCGA TTGAACTGGC GAATCAGGTT
GCAGCCATCG CCATCGCCCA AAAATCCCAG GAACAGTCGC AAGCCGATGC GGCGGCCAAC
ACGGCCCGCG CCGAGGCGGT CAAGTCAGAG GAACTGGTGA ATACCGCCCG GGAAGTGGCC
ATTGCGGAAC GCGCCAAATC CATTCAACTC ATTGGCGCAG CCCGGGAAGC GGAACAGCAG
GCGATTGCGA TCACCGTCGC AGCCGAAGCG GAACGAGCGG CTGCGGAAAA CCGCGCTCTG
GCGTTAAAGG TTGAAGCTGA TGCCAAGAAA TCAGCCGCCC TGGCTGAAGC CGAGGGGATT
GCCGCCATCA ACGAGGCCAA AAACCGCCTT GGTGCAGCGC AAATCGATCT TGCAGTGCGC
ATGCAGCTGA TCCAGTCCTT GCCCTTGATC ATTCAGCAGT CCGTCAAGCC TTTGGAGAAA
ATTGAATCCA TTCGCCTGTT TCAGGTGAAT GGCATGCCGA TGGGCAACGG CTCTGGCGGA
ACCGGGGCAA ACGCTGGCGG CCAAGGCGGA TCGCTCTCCG AGCAGGTGGT CAATTCAGCG
CTTCAGTACC AGGTTGCCAA ACCCATTGTG GATGCCATCA TGAAAGATGC CGGTCTGAAC
AACCCATCCT TGACGGGTAT CACGGATTCC GTGGCGTCCA TGCTGTCGAT GCCGACAGTG
CCGGCCAAGT TGCCCATGGA TCAAAGAGCG TAA
 
Protein sequence
MIELLVNIGI PAGLVLFPLL LIGMVFARLY HRATKETAFV RTGLGGQKVI MDGGAIVLPV 
FHETIPVNMN TLKLEVSRRE EQSLIALDRM RVDVAAAFFV RVKQTAESVS TAAQTLGRKT
MEPAALKTLV EDKFVDALRA TAATMTMREL QDKRREFVQA VQNAVAEDLE KNGLELESVS
LTSMDQTAKE FFNPSNAFDA EGLTRLTEET ESRRKQRNDI EQDTEVQVRT KNLEAERVKL
NISKEQEFAT LTQQQEISNA KADQTATIAK IEAERQREAE EVRINADRLV KERRIEADRT
VNNAEIDKNL SVQKKQIEAD RETRVKQAEQ RQAIELANQV AAIAIAQKSQ EQSQADAAAN
TARAEAVKSE ELVNTAREVA IAERAKSIQL IGAAREAEQQ AIAITVAAEA ERAAAENRAL
ALKVEADAKK SAALAEAEGI AAINEAKNRL GAAQIDLAVR MQLIQSLPLI IQQSVKPLEK
IESIRLFQVN GMPMGNGSGG TGANAGGQGG SLSEQVVNSA LQYQVAKPIV DAIMKDAGLN
NPSLTGITDS VASMLSMPTV PAKLPMDQRA