Gene Pnap_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2978 
Symbol 
ID4687371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3145697 
End bp3146209 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content64% 
IMG OID639835991 
ProductMarR family transcriptional regulator 
Protein accessionYP_983198 
Protein GI121605869 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.575889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.158224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAC ACCCTGTCAT TTCCACCATG CCAGCCGACC TCGACCTGAA GGCCGAACTC 
AAAACGCTGG GCTGCACCAA CTTCAAGCTG CGGCAGTTGA TGCGCCAGGT GGCGCAGCAC
TACGACCTTG AAATGGCCAG CGCCGGGCTC AAGACCACGC AGTATTCGCT ACTGAGCTAC
GTGCTCAAGC TCGGCCCGTT GCGGCCGGGC GAGCTGGCCA AAAGCATGAA GATGAGCGCC
TCCACCCTGA CGCGCAACCT CAAGCCGCTG GTGGATGCCG GCTGGCTGGA ACTGACCGCC
GGCAGCGACG CGCGCAGCCG GACCGTGGCC ATCACGCCGG CCGGACGCGC CAAGCGCGAA
GAAGCGCTGG GCCGCTGGAA AGTGGCGCAG GAAAGCCTGA ACCAGCGGCT GGGCGCCGGC
CGCGTGATTG CCCTGCACGG CCTGATCAAC GAATCCCTCG AACTTTTATC GCCTGTCAAT
CCTGAACCTG AACCTGGAGC CGATGATGAA TGA
 
Protein sequence
MSTHPVISTM PADLDLKAEL KTLGCTNFKL RQLMRQVAQH YDLEMASAGL KTTQYSLLSY 
VLKLGPLRPG ELAKSMKMSA STLTRNLKPL VDAGWLELTA GSDARSRTVA ITPAGRAKRE
EALGRWKVAQ ESLNQRLGAG RVIALHGLIN ESLELLSPVN PEPEPGADDE