Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2978 |
Symbol | |
ID | 4687371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3145697 |
End bp | 3146209 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639835991 |
Product | MarR family transcriptional regulator |
Protein accession | YP_983198 |
Protein GI | 121605869 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.575889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.158224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACAC ACCCTGTCAT TTCCACCATG CCAGCCGACC TCGACCTGAA GGCCGAACTC AAAACGCTGG GCTGCACCAA CTTCAAGCTG CGGCAGTTGA TGCGCCAGGT GGCGCAGCAC TACGACCTTG AAATGGCCAG CGCCGGGCTC AAGACCACGC AGTATTCGCT ACTGAGCTAC GTGCTCAAGC TCGGCCCGTT GCGGCCGGGC GAGCTGGCCA AAAGCATGAA GATGAGCGCC TCCACCCTGA CGCGCAACCT CAAGCCGCTG GTGGATGCCG GCTGGCTGGA ACTGACCGCC GGCAGCGACG CGCGCAGCCG GACCGTGGCC ATCACGCCGG CCGGACGCGC CAAGCGCGAA GAAGCGCTGG GCCGCTGGAA AGTGGCGCAG GAAAGCCTGA ACCAGCGGCT GGGCGCCGGC CGCGTGATTG CCCTGCACGG CCTGATCAAC GAATCCCTCG AACTTTTATC GCCTGTCAAT CCTGAACCTG AACCTGGAGC CGATGATGAA TGA
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Protein sequence | MSTHPVISTM PADLDLKAEL KTLGCTNFKL RQLMRQVAQH YDLEMASAGL KTTQYSLLSY VLKLGPLRPG ELAKSMKMSA STLTRNLKPL VDAGWLELTA GSDARSRTVA ITPAGRAKRE EALGRWKVAQ ESLNQRLGAG RVIALHGLIN ESLELLSPVN PEPEPGADDE
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