Gene Pnap_2933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2933 
Symbol 
ID4689088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3088807 
End bp3089958 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content65% 
IMG OID639835940 
ProductFAD dependent oxidoreductase 
Protein accessionYP_983153 
Protein GI121605824 
COG category[R] General function prediction only 
COG ID[COG3380] Predicted NAD/FAD-dependent oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.677522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTC TTGCGGCTTG CACCGTCATC GCGAATCCAT TCCTTTTCCT TCGTTTCATT 
CACTCAGAAA AAGTAAAAGA CATGACAACA AAACCCTATC TTCTTTCTCT TGAAACCCAT
CCGAAGCGCC ATATCGCCGT CGTGGGCGCG GGCATTGCCG GCATCACCTG CGCGCGCACG
CTGGTGCAAG CCGGCCACCA CGTCACGGTA TTTGAAAAAA GCAAGGGCGC GGGCGGGCGC
ATGGCTACTC GCGAGACCGA ATTTGGCGGC TTCGACCACG GCACGCAGTA TTTCACCGTG
CGCGACGAAC GCTTTGAAGA AGCGCTGACC ACGGCCACCG GCCTGGTTCG CCCCTGGAGC
GCCAACACCG TGCGCGTGCT GGACGACCTG GGCCGTGTCG TCGCCGCCTC GCTGCCGGCC
CGCGAGGCGC ATTGGGTGGC CAAACCGGGC ATGAACGCGC TGCTTCGCCA GTGGGCCCAG
CCGCTGCTGG ACGCCGGCCA TCTGGTGCCG GACACCCGCG TTGTCTATAT CGAGGAAGAC
AAGCTCGAAC CCCAGCGCTG GCAGTTGCAG ACCGACGGTC CGGGTGCGGG CGTGCATTCG
GGTTTTGACG CCGTGGTGCT GACCATTCCC GCACCGCAGG CTAGAGAATT GCTGGACGAC
TCCGAAGTGG CCGCGCCGCT GCTGGCCGAT CTGGCCGGCG TGAGCATCGC ACCGTGCTGG
ACGCTGATGG TGGCTTTTCC GCAGGCGCAG CAGCCCACGC TGGCCAGCCT GGGGCCGCAG
TGGAACGTGG CGCGCAGCAC CCACCACCGC ATCGCCTGGC TGGCGCGGGA GTCGTCCAAG
CCCGGACGCG GTCCGATTGA GCGCTGGACG GTTCAGGCCA GCCCCGCCTG GTCGCAGCGC
CACCTCGAAG ACGATTCAGA GCGCGTCAAG GCCAAATTGC TCAAGGCATT TACCGAAGTC
ACCGGCATCC GCGCCGAGCC GCCCTACGCC TCGGTGCATC GCTGGCGCTA TGCCCAAACC
AGCAAGCCGC TGGGCAAGAC CCACGCCTGG GATGCGGCCT CGCGCATCGG CGCCTGCGGC
GACTGGTGCC TGGGCCACCG GGTCGAGGAC GGCTTTGTGT CGGGCCTGGA AATGGCGCTG
GCCATTCTTT GA
 
Protein sequence
MALLAACTVI ANPFLFLRFI HSEKVKDMTT KPYLLSLETH PKRHIAVVGA GIAGITCART 
LVQAGHHVTV FEKSKGAGGR MATRETEFGG FDHGTQYFTV RDERFEEALT TATGLVRPWS
ANTVRVLDDL GRVVAASLPA REAHWVAKPG MNALLRQWAQ PLLDAGHLVP DTRVVYIEED
KLEPQRWQLQ TDGPGAGVHS GFDAVVLTIP APQARELLDD SEVAAPLLAD LAGVSIAPCW
TLMVAFPQAQ QPTLASLGPQ WNVARSTHHR IAWLARESSK PGRGPIERWT VQASPAWSQR
HLEDDSERVK AKLLKAFTEV TGIRAEPPYA SVHRWRYAQT SKPLGKTHAW DAASRIGACG
DWCLGHRVED GFVSGLEMAL AIL