| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2916 |
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| Symbol | |
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| ID | 4688861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3072033 |
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| End bp | 3072692 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639835923 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_983136 |
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| Protein GI | 121605807 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0248627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTACCG GAATCATCAC CGGCATGGGG CGCATCATCG CCATCCATAG CCAAGGCAGC
TCTTCACATC ATGGCAAGCG ACTCACTGTC GAAACACCTG CGGGTTATCT CGATGACGTG
GAGCTAGGCG ACAGCATTGC GCTCAACGGC GCATGCATGA CGGCCACATC GCTGGACCCG
GCCAACAACC GCTTCACCAT CGATATCTCC GCCGAATCGC TGGACAAAAC CTGCGGCCTG
GACCAGCCCG GCATCATCAA CCTCGAAAAA GCACTGCGCG CCCATGACCG CCTCGGCGGT
CATATCGTCT CCGGCCATGT CGATGGCATC GGCAGCGTCA CGCATTTCGA CGAGGTGGGT
GAAAGCTGGG AACTTCGCAT CCTTGCGCCG CAAGCACTGG GCAAATACCT GGCCTACAAA
GGCTCCATCA CGGTCAACGG CGTGAGCCTG ACGGTGAACC GGGTCGTTGA CCTGGCGGGT
GATGCAGATG GCACGGCGGG CTGCGAGATC AGCATCAACC TGATTCCCCA CACCGTTCAG
AACACGGCGC TTGGCCAGCT GGCCCAAGGC TCCCAGGTGA ACCTGGAAAT CGACCTGATT
GCACGCTATG TCGAGCGCAT GCTTCAAGAC TCCCCCATCC AACAACCCAT TGCCCAATGA
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| Protein sequence | MFTGIITGMG RIIAIHSQGS SSHHGKRLTV ETPAGYLDDV ELGDSIALNG ACMTATSLDP
ANNRFTIDIS AESLDKTCGL DQPGIINLEK ALRAHDRLGG HIVSGHVDGI GSVTHFDEVG
ESWELRILAP QALGKYLAYK GSITVNGVSL TVNRVVDLAG DADGTAGCEI SINLIPHTVQ
NTALGQLAQG SQVNLEIDLI ARYVERMLQD SPIQQPIAQ
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