Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2835 |
Symbol | |
ID | 4686904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2978727 |
End bp | 2979464 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639835843 |
Product | ABC transporter related |
Protein accession | YP_983058 |
Protein GI | 121605729 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00204247 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGAAA TGAACCCTAT GACACACGCA CCCCTCCCCG GCGGCATCCT GATTGAAGGC TTGCGCAAGG TGTACGGCCA CGGCGACACC GCCGTCGAGG CGCTCAAAAG CGTCAACATG ACGGTCGGCC CCGGCGAAGT GGTCGGGCTG GTCGGCCCCT CGGGTTCGGG CAAAAGCACG CTGCTCAAGT GCCTGGGCGC CATCATCGAG CCCACGTCTG GCCGCATGAC GCTGGGAAAC GAGCTGATCT ACGACAACGG CTGGACCACC TCCGACCTGC GCGCGCTACG GCGCGACCGC ATCGGCTTTG TGTTCCAGGC GCCGTACCTG ATTCCGTTTC TGGACGTGAC CGACAACGTC GCCCTGCTGC CCATGCTGGC CGGCGTGCCC AACGCCGAGG CCAGGCGCCG CGCGCTGGAA CTCTTGAGCG CGCTGGACGT GGCCCACCGC GCCAAGGCCG AGCCGTCGCA GCTGTCAGGC GGCGAGCAGC AGCGCGTCTC GATTGCGCGC GCGCTGGCGA ACCGCCCGCC GGTGATCCTG GCCGACGAGC CCACCGCGCC GCTGGACAGC GAACGCGCCC TGGCCGTGAT GCGCATCCTG AACCAGATGG CCCGGCAGGC GCAGACCGCC ATCATCGTGG TGACGCACGA CGAAAAAATC ATTCCCACCT TCAAGCGGAT TTATCACATC CGCGACGGCC AGACAGTGGA AGAAGCCGGA GAAGGGCGTA GCCTCTAA
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Protein sequence | MTEMNPMTHA PLPGGILIEG LRKVYGHGDT AVEALKSVNM TVGPGEVVGL VGPSGSGKST LLKCLGAIIE PTSGRMTLGN ELIYDNGWTT SDLRALRRDR IGFVFQAPYL IPFLDVTDNV ALLPMLAGVP NAEARRRALE LLSALDVAHR AKAEPSQLSG GEQQRVSIAR ALANRPPVIL ADEPTAPLDS ERALAVMRIL NQMARQAQTA IIVVTHDEKI IPTFKRIYHI RDGQTVEEAG EGRSL
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