| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2786 |
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| Symbol | |
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| ID | 4687633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2929717 |
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| End bp | 2930451 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639835794 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_983009 |
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| Protein GI | 121605680 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.103748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00337231 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATTGC AGGAAATTCT TTTTTCCCAG GGTTTTGGAA CGCGGCGCGT CTGCGCTGGG
CTGGTTCAAC AGGGTTTTGT GACCGTGGCG GGTGTCCCCT GTACGGAGCC AGCTATGGAA
TTTATAGCGG TGGGCCTGCG CTTCACGGTG CAGGGCGTGG CCTGGGAGTA CCACGAAAAA
GCCTATCTGA TGTTGCACAA GCCTGCCGGC CATGAATGCT CGCAAAAGCC GAGCACCTAT
CCCAGCATCT ACACGCTGCT GCCGGCACCG ATTCGCCAGC GTGGCGGCGG CGCGGCAGCC
GGCGTGCAGG CGGTTGGACG GCTGGACCAG GACACGACCG GCTTGCTGCT GTTGTCGGAC
GACGGCAAGT TCATTCACCG CATGAGTTCA CCCAGGCACC ACGTTCCCAA GGTCTATGAG
GTGACGGCCA AGCATCCGGT GGACGCGCAG CAGGTCCAGA AGCTGCTGGC CGGCGTGGTC
CTGGACGATG ACCCCAAGCC GGTCCGGGCT GCGGCCTGTG AGCAGACCAG CGAGCTGCAA
CTGAGCCTGA CGCTGACCGA AGGCAAGTAC CACCAGGTCA AGCGCATGAT TGCCGCCGTC
GGCAACCGGG TCGAAGGGCT CCACCGCTCG CGCATCGGTT CGCTGGCGCT GCCGGCGGAC
CTCAAGCCCG GTGAATGGCG CTGGCTGACG GTGCAAGACC TGGCCAGCAT TGCCGCAAGC
GCTGCGCAAA AGTGA
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| Protein sequence | MQLQEILFSQ GFGTRRVCAG LVQQGFVTVA GVPCTEPAME FIAVGLRFTV QGVAWEYHEK
AYLMLHKPAG HECSQKPSTY PSIYTLLPAP IRQRGGGAAA GVQAVGRLDQ DTTGLLLLSD
DGKFIHRMSS PRHHVPKVYE VTAKHPVDAQ QVQKLLAGVV LDDDPKPVRA AACEQTSELQ
LSLTLTEGKY HQVKRMIAAV GNRVEGLHRS RIGSLALPAD LKPGEWRWLT VQDLASIAAS
AAQK
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