Gene Pnap_2782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2782 
Symbol 
ID4687217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2925818 
End bp2926726 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID639835790 
Productputative transmembrane protein 
Protein accessionYP_983005 
Protein GI121605676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00262612 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAGTC TTCTTGATTC CTTCTGGCGG GCGGTGATGT ACTGCCTGCA TCCGCGCGTC 
ATCGTGCTGT CGATCCTGCC CGTCGTCATC ATGGGCGCGC TGTCGCTGAC CGTGGGCTAC
CTTTACTGGG AAAGCGCACT CATCGCGGTG CGCGGCAGCC TGGAAAGCTT CGAGCTGGTC
AACGCCATGC TGCACTGGCT GGAAGGCGTT GGCCTGGGCA GCCTGCACCT GGTGCTGGCG
CCTGCGCTGC TGCTGTTCCT GGCCATTCCG GTGATCGTCA TGGTGACCTT GCTGTTCGTG
GCGATGTTCA TGACGCCGAG CATGGTGGCC CTGGTGGCGA GCCGGCGGTT TCCGCAACTG
GAGCGTAAAC GAGGCGGCTC GCTGCTGGGC AGCATCCTGC GGTCGCTGGG TTCGACCGTT
CTGGCTGCCG TTGCGCTGGT GGCGACGGTT CCCCTGTGGC TGGTGCCGCC CCTGGTATTG
ATACTGCCGC CCTTGATCTG GGGCTGGCTG ACCTACCGCG TCATGTCCTA CGATGCGCTG
GCCGACCATG CCAGCCTTGA AGAGCGGGAG CAGATTTTCC GGGAAAACCG CCCGGCGCTG
CTCGGCATTG GCGTGCTCAG CGGCTACCTT GGCGCCGCGC CCAGCCTGCT CTGGGCATCG
GGCGCCATGT TCATCGCCAT GGCGCCGATC CTGGTGCCGC TGGCGATCTG GATTTACACC
CTGGTGTTTG CCTTCTCGTC GCTCTGGTTT GCCCACTACT GCCTGGCCGC GCTGGAGCAG
CTTCGCAAGC GAAATAATGC TTTTGCGCAA GCACCACGGG CACAAGCTGC TACTGATTTG
ATAGTTGATG CACCGCTGCC GGACGTTTTC CCCAAGTCTG CGTCCGGCCG GCCTGATTCA
TTGTCCTAA
 
Protein sequence
MNSLLDSFWR AVMYCLHPRV IVLSILPVVI MGALSLTVGY LYWESALIAV RGSLESFELV 
NAMLHWLEGV GLGSLHLVLA PALLLFLAIP VIVMVTLLFV AMFMTPSMVA LVASRRFPQL
ERKRGGSLLG SILRSLGSTV LAAVALVATV PLWLVPPLVL ILPPLIWGWL TYRVMSYDAL
ADHASLEERE QIFRENRPAL LGIGVLSGYL GAAPSLLWAS GAMFIAMAPI LVPLAIWIYT
LVFAFSSLWF AHYCLAALEQ LRKRNNAFAQ APRAQAATDL IVDAPLPDVF PKSASGRPDS
LS