Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2725 |
Symbol | |
ID | 4688645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2871239 |
End bp | 2872303 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639835733 |
Product | Rieske (2Fe-2S) domain-containing protein |
Protein accession | YP_982948 |
Protein GI | 121605619 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0149406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCCCCA AAAACACCTG GTATGTCGCC TGCACCCCGC AGGACATCGA CGACAAGCCG CTGGGCCGCA AGATCTGCGG CGAGCGCATC GTGTTCTACC GCGCCCAGGA AGGCCGCGTG GCGGCGCTTG AAGACTTCTG CCCGCACCGG GGCGCGCCGC TGTCGCTCGG CTTTGTCAGC GAAGGCAAGC TGGTCTGCGG CTACCACGGC CTGGAGATGG GCTGCGACGG CAAGACGATT GCCATGCCCG GCCAGCGCGT GCGCGGCTTT CCGCAAATCC GCAGCTACCC GGTGGAAGAA CGCTACGGCT TCATCTGGGT ATGGCCGGGC GATGCCGCGC AGGCTGACCC GGCAAAAATT CCCCACCAGG ACTGGTACGA AAACCCCGAG TGGGCCTACG GCGGCGGCAT GTTCCATATC CACTGCGACT ACCGGCTGAT GATCGACAAC CTGATGGACC TGACGCACGA AACCTATGTG CATTCGGGCA GCATCGGCCA GAAGGAAATC GACGAAGTGC CATGCAAGAC CACCGTCAAT GGCGACGAGG TGGTCACCAG CCGGTTCATG GAAAACATCA TGCCGCCGCC GTTCTGGAAG CTGGCCCTGC GCGGCAACAA CCTGGCCGAC GACGTGCCGG TGGACCGCTG GCAGATCTGC CGCTTCACGC CGCCCAGCCA TGTGATGATC GAAGTCGGCG TGGCCCATGC CGGCATGGGC GGCTACGACG CCCCGCCCGA CCACAAGGCC TACAGCATCG TGGTTGATTT CATCACCCCC GAAACCGAAA CCTCGATCTG GTATTTCTGG GGCATGGCGC GCAAGTTCAA CCCCAGGGAC AAGGCGTTGA CGGCCACCAT CCGCGAAGGC CAGGGCAAAA TTTTCAGTGA AGACCTGGAA ATGCTCCAGC GCCAGCAGCA AAACCTGCTC GACTACCCGG AGCGCGCCTT GCTCAAGCTC AATATCGACG CTGGCGGCGT GCAGTCGCGC AAGATACTGG ACCGCATCAT GGCCGAGGAG CAGGCGGCCG GCGCTGCTTC AGCCAGTGCA ACGGCCACCG CGTAA
|
Protein sequence | MFPKNTWYVA CTPQDIDDKP LGRKICGERI VFYRAQEGRV AALEDFCPHR GAPLSLGFVS EGKLVCGYHG LEMGCDGKTI AMPGQRVRGF PQIRSYPVEE RYGFIWVWPG DAAQADPAKI PHQDWYENPE WAYGGGMFHI HCDYRLMIDN LMDLTHETYV HSGSIGQKEI DEVPCKTTVN GDEVVTSRFM ENIMPPPFWK LALRGNNLAD DVPVDRWQIC RFTPPSHVMI EVGVAHAGMG GYDAPPDHKA YSIVVDFITP ETETSIWYFW GMARKFNPRD KALTATIREG QGKIFSEDLE MLQRQQQNLL DYPERALLKL NIDAGGVQSR KILDRIMAEE QAAGAASASA TATA
|
| |