| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2708 |
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| Symbol | |
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| ID | 4689789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2855737 |
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| End bp | 2856690 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639835716 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_982931 |
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| Protein GI | 121605602 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0276102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.900999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATG CCATGTTAAG GGTTATCCCT AGCTATGCTT TGTATGGCGA TCAGGCGCAG
CCCGGCTGGA AAAACTCCTT CGATTTCGAA TGGATTCCGC AGCGCTCCGG CCCGTACAAC
TGGGAAATAC GCCCGCATGT GCATGAAGCC TTCATCCAGA TCCTGTACCT GACGCAGGGC
TCTGTGGAGG TGTTGCTCGA CAACGCCAAG TGGCGGGTTA CGGCGCCGTG CCTGCTGGTC
GTTCCAGCAC AAACCGTGCA TGGCTTTCAC TTCGCCGCCG ATGTCAACGG CCCGGTGGTC
ACGGCCACGC AGCGGCCACT GGAATCGCTG GCGGCGCTGG CCATGCCCGA GTTGCTGCAG
ACCATTCGCA AGCCCGCCGT GATTTCACTC GACGCTGACG GCCGCCATGC CGAAGCGTTG
ATGCCGCTGT TCCTGGCCAT CGAGCGCGAG GCGCGGCTGC ATGCGATTGG CCAGTTCGCG
GCCGGCATGT CGCTGCTGAC GGCGCTGTTT GTCCAGGTGG CGCGCCTGGG CCAGGCCAGG
GCGCCGGCGC CGCTGGCCGT CAGCCTGCGC AAGACCGCGC AGATCGAGAA ATTCCGCGCG
CTGGTCAACG ACAACTTCAA GAAGCGCCTG CCGATGGCGT TTTATGCGGG CCAGCTGGGC
GTGACGCCCG GCCAGCTGTC GCGGCTGTGC CGCGAGGTGC TGGGGACTTC CAGCCTGGAG
GTCATCAATG CGCGCATCGT GCATGAGGCG CAGCGCGACC TGGTGTTCAC CAGCAGCAGC
ATCCAGCAGC TGGCCGATGC GCTGGGCTTT GCCGACGAAG CCTATTTTGG CCGGTTTTTC
CGCAAGCACA CGGGGCTGAC GCCGGGCGAA TTCCGCACCC GCGCGCTGCA GAGCATGCTC
AAGCCCGACA CCTGGCCGGC TGCCGGGCCA GAGGCGGTTG CAGCGCCGGG GTGA
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| Protein sequence | MNNAMLRVIP SYALYGDQAQ PGWKNSFDFE WIPQRSGPYN WEIRPHVHEA FIQILYLTQG
SVEVLLDNAK WRVTAPCLLV VPAQTVHGFH FAADVNGPVV TATQRPLESL AALAMPELLQ
TIRKPAVISL DADGRHAEAL MPLFLAIERE ARLHAIGQFA AGMSLLTALF VQVARLGQAR
APAPLAVSLR KTAQIEKFRA LVNDNFKKRL PMAFYAGQLG VTPGQLSRLC REVLGTSSLE
VINARIVHEA QRDLVFTSSS IQQLADALGF ADEAYFGRFF RKHTGLTPGE FRTRALQSML
KPDTWPAAGP EAVAAPG
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