| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2706 |
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| Symbol | |
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| ID | 4689806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2853055 |
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| End bp | 2853849 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639835714 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_982929 |
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| Protein GI | 121605600 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.14445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGAAC AACTCAACGG CGCCACCCGG GTCCATTTCA TCGTCGGCGA CCCGATTGCC
CAGGTCAAAT CCCCGGCCGG CGTGACGCAA GCCTTTGAAG CCCACGGCCG CAATGCCATC
GTCGTCCCCG CCCATGTGGC GCCCGAGGAT TTGCTGGTCT GGCTGGCCGG CACCTCGCGC
TCGCGCAACG TGGACGGCAT CATCGTCACG GTGCCGCACA AGTTCGCCGC CTTTGAACTG
TGCGCCACCA CCTCGGACCG GGCGCGCTTT TTGAAAACCG CCAACGTGAT GCGCCGCAAC
GCCGACGGCA GCTGGCACGG CGACATGTTC GACGGCCAGG GCTTTGTCGC CGCCCTGCAG
GACAGCGGCG CCCAGCCAGC GGGCAAGCGG GCGCTGCTGG TCGGCGCGGG CGGTGCGGGT
TCGGCGATTG CGCATGCGGT CGTGATGTCG GGCGTCAGCA TGCTGGCGAT TCACGACGAA
AGCGCGGCGC GGCGCGACAC GCTGATCAAG CGGCTCGACG GCCTGAACGG CGTTCGTGTC
GAGGCCGGCA GCGCCAATCC CGAAGGGTTT GACCTGGTGC TCAACGCCAC GCCCATCGGC
ATGAAGGACA GCGACCCCTT CCCTGTCGAT GTCACCCGGC TGACGCCGCA CATGCATGTG
GGCTGCGTGA TCACCGCGCC CGCCATCACG CCGCTGATTG CCGCAGCGCG CGCCACAGGC
TGCAGCACGC AGACCGGCGC CGACATGTTT GCCAAGGTGC GCGATTTGAT GGTCGATTTC
TTGCTGGAGA AATGA
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| Protein sequence | MLEQLNGATR VHFIVGDPIA QVKSPAGVTQ AFEAHGRNAI VVPAHVAPED LLVWLAGTSR
SRNVDGIIVT VPHKFAAFEL CATTSDRARF LKTANVMRRN ADGSWHGDMF DGQGFVAALQ
DSGAQPAGKR ALLVGAGGAG SAIAHAVVMS GVSMLAIHDE SAARRDTLIK RLDGLNGVRV
EAGSANPEGF DLVLNATPIG MKDSDPFPVD VTRLTPHMHV GCVITAPAIT PLIAAARATG
CSTQTGADMF AKVRDLMVDF LLEK
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