| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2683 |
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| Symbol | |
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| ID | 4689848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2825394 |
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| End bp | 2826548 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639835691 |
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| Product | glycine cleavage system T protein |
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| Protein accession | YP_982906 |
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| Protein GI | 121605577 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.837498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCG AATCGTCCGC CACCCCTGCC CCTTTGCTCA AAACGCCGCT GAATGACCTG
CATGTCGAAC TCGGCGCGCG CATGGTGCCG TTTGCCGGCT ACTCCATGCC GGTGCAATAC
CCGGCCGGCC TGATGGCCGA ACACCTGCAC ACCCGCAGCG CCGCTGGCCT GTTCGACGTG
TCACACATGG GCCAGTTGCG GCTCGTCGGC CCCGATGCAG CCGCCGCCTT TGAAAGCCTG
ATGCCCGTCG ATGTGATCGA CCTGGCGCCA GGCAGGCAGC GCTACGGCCT GCTGCTCAAT
GACGAGGGCG GCATCATTGA CGACCTGATG TTCTTCAACC GCGACCATGC CAACGGCGGC
GATATTTTCG TCATCGTCAA TGGCGCCTGC AAGGCGGGCG ACATCGCGCA TATTCAGGCC
AAAATCGGCC AGCGCTGCGA GGTCATCCCC ATGCCCGAGA TGGCGCTGCT GGCGCTGCAG
GGGCCGCAGG CCGTCACTGC ATTGCAGCGC CTGGCGCCGG GCGTGGAGCA ACTGGTGTTC
ATGACCGGCG GCCGCTTCAC GGTCGCGGGC TGCGACTGCT TTTTGACCCG CAGCGGCTAC
ACCGGCGAAG ACGGTTTCGA GATTTCCGTT GATGCGTCGC AGGCCGATGC ACTGGCTAGA
GCCCTGCTGG CCCAGCCCGA AGTCAAACCC GTTGGCCTGG GCGCGCGCAA CTCGCTGCGG
CTGGAAGCCG GCCTGTGCCT GTACGGCAAC GACATCGACA CCACCACCAC ACCGGTCGAA
GCCAGCCTGA ACTGGGCGAT ACAAAAAGTC CGGCGCACCG GCGGCGCGCG GGCCGGCGGC
TTTCCGGGCG CTGACAAAAT CCTGGCCCAA CTGGACAACC CGGCCAGCCT GACCCGAAAA
CGCGTCGGCT TGAAGGCGCT CGAACGCATT CCGGTGCGCG ACCACACGGC CTTGCACGGC
ACCGACGGCA CGCCCATCGG CGAAGTCACC AGCGGACTGC TCGGCCCCAC GATCAACCAG
CCCGTCGCCA TGGGCTACGT CCAGCCGGAA TTCGCCGCCA TCGGCACGCG CGTGAATGCC
ATGGTGCGCG GCAAGCCGGT GCCGATGGAA GTCACGGCTA TGCCCTTCGT TCCCACCCGC
TACCACCGCG GCTGA
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| Protein sequence | MSLESSATPA PLLKTPLNDL HVELGARMVP FAGYSMPVQY PAGLMAEHLH TRSAAGLFDV
SHMGQLRLVG PDAAAAFESL MPVDVIDLAP GRQRYGLLLN DEGGIIDDLM FFNRDHANGG
DIFVIVNGAC KAGDIAHIQA KIGQRCEVIP MPEMALLALQ GPQAVTALQR LAPGVEQLVF
MTGGRFTVAG CDCFLTRSGY TGEDGFEISV DASQADALAR ALLAQPEVKP VGLGARNSLR
LEAGLCLYGN DIDTTTTPVE ASLNWAIQKV RRTGGARAGG FPGADKILAQ LDNPASLTRK
RVGLKALERI PVRDHTALHG TDGTPIGEVT SGLLGPTINQ PVAMGYVQPE FAAIGTRVNA
MVRGKPVPME VTAMPFVPTR YHRG
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