Gene Pnap_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2500 
Symbol 
ID4688006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2635393 
End bp2635536 
Gene Length144 bp 
Protein Length47 aa 
Translation table11 
GC content63% 
IMG OID639835508 
Producthypothetical protein 
Protein accessionYP_982725 
Protein GI121605396 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGCA CACCCATCGG CTCGCCGGAC ACCATGATTG CCGCTCACGC CCTGAGCCAA 
CAGGCCCTGC TGGTCACCAA CCACACCCGC GAGTTTGCCC AGTTGCCTGG CTTGCAGCCA
GGCAACTGGG TCACAGTTAC TTGA
 
Protein sequence
MARTPIGSPD TMIAAHALSQ QALLVTNHTR EFAQLPGLQP GNWVTVT