| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2479 |
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| Symbol | |
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| ID | 4689269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2617087 |
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| End bp | 2618124 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639835487 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_982704 |
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| Protein GI | 121605375 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.493814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGAA AGACCAGCAA AGCGACGCGC CTGACTGCAG AGGATATTCA AGGCGCATGG
GTCATTATGC CGACCCCCTC CACTCCGGAT GCTTCGGACT GGCGCAGCAC GCACACGGTT
GATCTCGACG AGACGGCCCG GATCGTCGAG GAGTTGATAG CGGCCGGGGT CAATGGCATT
CTAAGCCACG GCACTTTTGG TGAATGCGCG ACGCTGACGT GGGAAGAGAA GCGGGATTTT
GTTTCAACGG TCGTCGAAAC CGCCCGTGGT CGAGTGCCCT ACTTCTGCGG CACAACAGCC
TTGAATACCC GTGAAGTTAT ACGCCAGACC CGCGAAGTGA TGGACATTGG TGCCCAAGGA
ACCATGCTCG GCGTGCCGAT GTGGGTGAAG ATGGATCTGC CCACCGCCGT GCAGTTTTAT
CGCGATGTGG CGGAAGCGGT GCCAGATGCT GCCATCGCTG TTTATGCCAA CCCGGAGGCT
TTCAAATTTG ATTTTCCTCG CCCGTTTTGG GCCGAAATGT CCAAAATCCC GCAAGTTGTT
ACAGCCAAGT ACTTGGGCAT CGGAATGCTG GACTTGGATC TGAAATTGGC TCCAAATATT
CGCTTCCTTC CGCATGAGGA TGACTATTAC GCTGCGGCCC GAATCAATCC TGAGCGCATG
ACCGCCTTCT GGTCCAGCGG CTCCATGTGC GGTCCAGCGA CTGCCCTCAT GCTTCGTGAT
GCGGTGACAC AGGCCAAGAC GACCGGTGAC TGGACCAAGG CCAAGGCCAT TTCAGATGAC
ATGCGCGCTG CCGACGCCAC ACTGTTTCCA CGCGGCGATT TCTCGGAATT CTCGAAATAC
AACATTGGTC TCGAAAAAGC ACGAATGGAC GAGGCGGGTT GGCTCAAAGC GGGGCCGTGC
CGGCCACCCT ATACGCTGGT ACCAGATGAA TACCTTGCAG GTGCTCGAAA ATCAGGCAAC
GCCTGGGCCG CACTGCATAC CAAGTACGCC GAGGAATTGA AGAAAACCAA AACGGCAACC
GGCTCGAAAA AGAAGTGA
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| Protein sequence | MTRKTSKATR LTAEDIQGAW VIMPTPSTPD ASDWRSTHTV DLDETARIVE ELIAAGVNGI
LSHGTFGECA TLTWEEKRDF VSTVVETARG RVPYFCGTTA LNTREVIRQT REVMDIGAQG
TMLGVPMWVK MDLPTAVQFY RDVAEAVPDA AIAVYANPEA FKFDFPRPFW AEMSKIPQVV
TAKYLGIGML DLDLKLAPNI RFLPHEDDYY AAARINPERM TAFWSSGSMC GPATALMLRD
AVTQAKTTGD WTKAKAISDD MRAADATLFP RGDFSEFSKY NIGLEKARMD EAGWLKAGPC
RPPYTLVPDE YLAGARKSGN AWAALHTKYA EELKKTKTAT GSKKK
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