Gene Pnap_2440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2440 
Symbol 
ID4688793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2579464 
End bp2581086 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content62% 
IMG OID639835451 
Productrecombinase 
Protein accessionYP_982668 
Protein GI121605339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTCA GCGATCCGCG CCAGGCTTCG GGCCACAGCA GCGAGCGCCA GATGGCTTAC 
GCCACCCAGT GGGCCGCTGA ACACGGCCTC CTCCTGGACG AAACGCTCTC GCTGCGGGAT
GAGGGTCTAT CGGCCTACCA CCAGCGGCAC ATCAAGTCCG GGGCACTCGG CGTCTTCCTG
GTCGCTGTCG AACAGGGCCG GATACCCACT GGGTCTGTGC TGGTGGTGGA AGGCCTCGAC
CGACTTTCGA GGGCAGAACC GATCCAGGCC CAGGCCCAAC TGGCTCAGAT TGTAAATGCC
GGCATCACGG TGGTGACGGC CAGCGACGGA AAGAAGTACA GCCGCGAGCA CCTCAAGGCC
AACCCGATGG ACCTGGTGTA TTCGCTGCTG GTCATGATTC GCGCCCATGA AGAAAGCGAC
ACCAAGAGCA AACGGGTACT GGCCAGCATC AGAAAACAGT GCGAAGGCTG GATCGCTGGC
ACAAACCGCG CGCTGATTCG AAATGGAAAA GACCCGGTCT GGCTGCGGCT GGTAGATGGC
CAGTGGCAGG AAATACCAGA ACGCGTGGCG GCTGTGCGTG AAGGCCTGCG GTTGTATTTG
ATGGGCTACG GGGCCACCAA GATCATCGAG CGACTGACCG AGCAGCGGCT TTCGCTGACA
GGACGCGGCC CCCAATCGCT GCAGATCTAC CGACTGGTGA AACAACGAGC ATTGATCGGC
GAAAAAGAAA TGGCCCTGGG CACTGATACC TACCGGATAC CCGGCTACTA CCCTGCCCTG
CTGACCACGG CCGAATGGGA CGGCCTGCAG CTGGCCAACA GCGGCCGTGG GCGGCGCAGG
GTCAAGGGTC CAGTGCCTCA CATACTCACC GGCATCGGAA TCACCGTGTG CGGCTATTGC
GGCCGCGCGC TGGTTGGGCA GAACATTGGC ACCCGCAACC GGGACGAACT CGGCCGCATC
CAGCCCGGCC ACAGACGCCT GCACTGCACC AGCTACTCGC ACGGCGGTTG CTCGGTCGGC
GGGTCCGTGT CCGTCTACCC GTTTGAGCGA GCTCTGATGG AGTACTGCTC GGACATCGTC
AACCTGCAGG CGCTATATGG AGCTGATCGG TCGGCCGGAC CGATGGCCAA GCTGACCAAA
GCCCGGCAGG ACCTGGTGGA CGTGGCCAGC AAGCTGGAAA GACTCACCGA TGCCATGCTG
GCCAGCGCCG GGGATGGCGT GCCGCTGACC TTTGCCAAGC GTGCCCGCGA GCTGGAGGCA
GAACAACAGC GGCTGGAGGC CACCATCCAG GAGGCAGAGC GCGATTTGGC TGCAACGGCA
CGCACCGACA TTCAGGGCAC TGACGAAGCG TGGAAGCGCC TTGCGGCCGG TGTGGAGGCG
CAGGAATACG AAGCACGCCT GCAAACCCGC CAGCTGGTAG CCGATACCTT CGAGCGCATC
GTGATTTATC AGCGTGGTGT GCGACCAACA CCTACCGAAG ACAAAGGCCC GATGGACATG
ATGCTGATGG CGAAAGGCGG CACAGCACGC ATGTTGCGTA TAGACCGCAA AGGCCAATTG
ATCATGGCCG AAAGTCTGTC TGAATCTGTG GGCACAAACA GAAATACGCC CATCACCCCG
TGA
 
Protein sequence
MRFSDPRQAS GHSSERQMAY ATQWAAEHGL LLDETLSLRD EGLSAYHQRH IKSGALGVFL 
VAVEQGRIPT GSVLVVEGLD RLSRAEPIQA QAQLAQIVNA GITVVTASDG KKYSREHLKA
NPMDLVYSLL VMIRAHEESD TKSKRVLASI RKQCEGWIAG TNRALIRNGK DPVWLRLVDG
QWQEIPERVA AVREGLRLYL MGYGATKIIE RLTEQRLSLT GRGPQSLQIY RLVKQRALIG
EKEMALGTDT YRIPGYYPAL LTTAEWDGLQ LANSGRGRRR VKGPVPHILT GIGITVCGYC
GRALVGQNIG TRNRDELGRI QPGHRRLHCT SYSHGGCSVG GSVSVYPFER ALMEYCSDIV
NLQALYGADR SAGPMAKLTK ARQDLVDVAS KLERLTDAML ASAGDGVPLT FAKRARELEA
EQQRLEATIQ EAERDLAATA RTDIQGTDEA WKRLAAGVEA QEYEARLQTR QLVADTFERI
VIYQRGVRPT PTEDKGPMDM MLMAKGGTAR MLRIDRKGQL IMAESLSESV GTNRNTPITP