| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2407 |
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| Symbol | |
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| ID | 4687013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2538902 |
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| End bp | 2540155 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639835417 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_982635 |
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| Protein GI | 121605306 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTT CATCACTCGG CTTTTCGCCG GCCCTGCTGC CTGTCCTGCT GCGCGCCATC
GCCGAAAAAG GCTACCTTGC GCCGACCGCC ATCCAGGCAG CGGCGATTCC CGCCATCCTG
CAAGGCCGCG ACATCGTCGG TTCGGCCCAG ACCGGCTCCG GCAAGACCGC CGCCTTCGCC
CTGCCGCTGC TGCATCAACT GGCCCAGGCG CCGGCTGATG CCAAGCGACG CATTCGCGGC
CTGGTGCTGG TGCCGACGCG CGAACTGGCG GCGCAGGTGG GCGAGGCCAT CGTCAGCCTG
GCCAACTACC TGCCGCAGCG CGTCAAGGTG GCGGTGGTGT TCGGCGGCGT GTCGATCAAT
CCGCAAATGA TGAACCTGCG CGGCGGCGCC GACATCATCG TTGCCACGCC AGGCCGGTTG
ATCGACCTGA TCGACCACAA CGCGCTGAAG CTCGACCAGG TCGGCATGCT GGTGCTCGAT
GAGGCCGACC GCCTGCTCGA CCTGGGTTTT GGCGAGGAAC TGGGCCGCAT CCTGGCCTTG
CTGCCGGCGC AGCGCCAGAG CCTGTTTTTC TCGGCCACCT TTCCACCCGC GATTGAAGCG
CTGGCCGCCG GCATGCTGAC GGACCCCTTG CGCATTGAAG TCGAAGCGGT AAAGCAGGCC
GAGCCCGAGA TCGTGCAGCG CGCCATTGAA GTGGACCCGA GCCGGCGCAC CCAGCTGCTG
CGCCACTTGG CGCAGACCGA AAAATGGAGC CGGGTGCTGG TGTTCGTGGC GACCAAGCAT
GCCGCCGAGA TCGTCGCCGA CAAGCTGCGC AAGGCCGACA TCGAAGCCGA ACCCTTTCAT
GGCGAACTGA GCCAGGGAAA ACGCAACCAG GTGCTGCAGG ATTTCAAGGC AAAGCTGCTG
CAGGTGGTGG TGGCCACCGA TGTGGCGGCG CGCGGCATTG ACATTGCCCA ATTGCCGGTC
GTGGTCAATT ACGACTTGCC GCGTTCATCA GTAGATTACA TACATCGCAT TGGCCGCACC
GGCCGGGCCG GCGAAACCGG CATCGCCATC AGCTTTGTCA GCGCCGAGAC CGAAGCGCAC
TTCAAGTTGA TTGAAAAGCG TCAAAAGATG AGCGTGCCGC GTGAACAGGT CGCGGGGTTT
GAGCCGGTCG AGGTGCAGAT TCCGAATGCC GCCGATCCGG CGGGGACGGG CGGCATCAAG
GGCAAGCGGC CCAGCAAAAA GGACAAGCTG CGGGCACTCG CCGCCGGAAA ATAA
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| Protein sequence | MPFSSLGFSP ALLPVLLRAI AEKGYLAPTA IQAAAIPAIL QGRDIVGSAQ TGSGKTAAFA
LPLLHQLAQA PADAKRRIRG LVLVPTRELA AQVGEAIVSL ANYLPQRVKV AVVFGGVSIN
PQMMNLRGGA DIIVATPGRL IDLIDHNALK LDQVGMLVLD EADRLLDLGF GEELGRILAL
LPAQRQSLFF SATFPPAIEA LAAGMLTDPL RIEVEAVKQA EPEIVQRAIE VDPSRRTQLL
RHLAQTEKWS RVLVFVATKH AAEIVADKLR KADIEAEPFH GELSQGKRNQ VLQDFKAKLL
QVVVATDVAA RGIDIAQLPV VVNYDLPRSS VDYIHRIGRT GRAGETGIAI SFVSAETEAH
FKLIEKRQKM SVPREQVAGF EPVEVQIPNA ADPAGTGGIK GKRPSKKDKL RALAAGK
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