| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2362 |
|---|
| Symbol | |
|---|
| ID | 4687229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 2487776 |
|---|
| End bp | 2488543 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639835372 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_982590 |
|---|
| Protein GI | 121605261 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATGTA TAGCTATAGA TGCGCGTAGG ATATGCGCAA AGCTCGGAAA TGACGAGGTA
TTGCACGGTA TTTCGCTGGT GCTGCCGCGC GCGCGCTGGA CCAGCATCGT CGGACCCAAC
GGCGCCGGCA AATCGACCCT GCTCAAGGCG CTGGCCGGGC TGCTGCCGCA CAGCGGAACG
GTCGCCTTGC TCGGCCAGCC GATGGCCAAA ATGCGCGGGC GCGACCGGGC GCGGCAACTG
TCCTGGCTGG GCCAGAACGA AAGCTCGGCC GACGACCTGA CGGCCTACGA CGTGGCCATG
CTCGGACGAC TGCCGCACCA GGCCTGGCTG GCGCCGCCCA GCGCCGCCGA CCATGCCGCC
GTCGAGCGCG CCCTGCGTGC CACGCAGGCC TGGGACTGGC GCGGCCGGCC GCTGGGCCAG
CTCTCGGGCG GCGAGCGCCA GCGCGTGCTG CTGGCGCGTG CGCTGGCGGT CGAGGCCGAG
GTGCTGCTGA TGGACGAGCC GCTGGCCAAC CTCGACCCGC CGCACCAGAC CGACTGGCTC
TTGATGGTGC GCGATCTGGT CGCCAGCGGC AAGACCGTGG TCAGCGTGCT GCATGAAATC
TCGTTCGCGC TGCAGGCCGA TGAGCTGGTG GTGATGGACA AGGGCCGGGT GACGCACCAG
GGCGCCTGCG TTGACGCCGC CACGCACCGC GCGCTCGAAG GCGTCTTTGA CCACCGCATT
GCCGTGCACC ACCTGGCCGG TCAATGGCTG GCTTTGCCGC GAATTTAG
|
|---|
| Protein sequence | MECIAIDARR ICAKLGNDEV LHGISLVLPR ARWTSIVGPN GAGKSTLLKA LAGLLPHSGT
VALLGQPMAK MRGRDRARQL SWLGQNESSA DDLTAYDVAM LGRLPHQAWL APPSAADHAA
VERALRATQA WDWRGRPLGQ LSGGERQRVL LARALAVEAE VLLMDEPLAN LDPPHQTDWL
LMVRDLVASG KTVVSVLHEI SFALQADELV VMDKGRVTHQ GACVDAATHR ALEGVFDHRI
AVHHLAGQWL ALPRI
|
|---|
| |