| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2215 |
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| Symbol | |
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| ID | 4686518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2364420 |
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| End bp | 2366882 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639835225 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_982444 |
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| Protein GI | 121605115 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.311174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTG GCCTGCCACG ATTTCTCGAT TCACCTTCTT GCCGGCCTGA TTTTTTTCGC
GGGCTGCTGA GCCTCGCCTG CGCGCCGCGC CTTGCCATCA TCGGCGTGCT GCTGATGCTG
GCCGCACTGT GCGCCCAGGC CCAGCCCGGA GACGTGGACA TCTCGCTGGA CACGGCGCGC
CTGAAGATTG AGAAGGCGCG AAAAACCCTC GATGACCCGC CCAAGGACGC GGCCGATCTG
GTGCCCCTGC GCGCCCAGGT GCTGGACGCC GGCACCCAGG CCGAGGCGGC GGCCGCGCTG
CTGTCGCCGC AACTGGCCAG TGTCCAGGCA CGGCTCGATG AGTTGGGGCC GCTCTTGCCT
GGACAGGTCG AGGCGCCCGA CGTGGCCGGC CTGCGCACCC AACTGAACAA GACCCGTGCC
GAACTCGATG CCCAGCTCAA GCGGGCCAGG CTGCTGGCCG TGGAAAGCGA GCAGACGGCC
GGGGAAATAT CGGCGCTGCG GCGCTCCGAA TTCCAGGCGC GGCTGGGCGA GCGCACTTCC
TCGATCCTGA GCAGCCTGTT CTGGTCTGAA TTAAGGGCGG ACCTGCCCGG CGATGCGCAG
CGTGCCGGCC GCCTGTTCGA TGGGCTGGCC ATGGCGGCCC GGGCCAGCGG CGCCTGGGTC
TGGTCCAGCG TGGGCCTGGT CTTGCTGGTG CTGCTGGGCC TGCATGCGTG GGCCGGCCAT
GCGCTCCTGC GGCTGACGAC CACCCGCGTG CCGCCGGGCC GCCTGCGCCG CTCGCTGCAT
GCCTGGACAC GCGTGCTGCT GCCCACGGCC AGCGCCGGAC TGATGGCCGA GGCGGTTTAC
CTCGGGCTGG TCTGGGTCAC GCCCTTGCCG GATGCGGTGG CGCCGCTCAT GAGCCGGCTG
GCCGGCGTCA TCTGTTTTGG CGGCTACGTC GTGGGCCTGG GCCATGCCTT GCTGCTGCCG
GCGCGTCCGT CCTGGCGGCT GCTGCCCCTG CCGGACGTGC TGGCGCTCAA ACTGCGCTGG
CTGCCGCCCC TGCTGGCGCT GCTGATGGTG CTGACCTGGG CGGTCGTGCA GCTGAGCGCC
CAGATCAATG CCAGCCTGGT CACCACGGTG GCGGCCGACT GCATCGTCGC ACTGGTCATG
GTGATGCTCA TTGCGCTGGG GCTGGCGCAA AGCGATTTTG CGCGCCGGCA GGCCCTGGCT
ACGCCCGAGT CGGCCGCCAG TTGGCCGCCA AGCCCGCTGT GGCTGACCAG CGTGGTCAGC
CTGGCCTGGG CAGGCGTGGC CGTCAGCTTG CTGGCGCTGC TGCTCGGCTA TGTGGCGCTG
GGCAGTTTTC TGGTCCACCA GATGGCCTGG ATCGCGGTCG TGCTGGGCTC GGCCTACCTG
TTGGCGGTGT TGATCGACGA TGCTTTCATC ACGCTGCTGA GCCCGCTTGC CACTGCCGCT
GGTGCGCCTG AGGCGGCGGG CGCGGCGGGC GAAGAGCCGG CAACCCCGTT TTTCAAGGTC
CGCCGGCAGG CCGCCGTGCT GCTGTCGGGC GTTGGCCGCC TGCTGGTGGT GGCGCTCACG
CTGATGCTGT TGCTGGCGCC GTTTGGCGAA GGCCCTTCAG AGCTGTTCCA GCGCGCCGAC
AAGCTGCACC AGGGGGTGTC GATTGGCGAA TTCCAGATTC GCCCGATGTC GGTACTGCAG
GCGCTGACGG TGATCGGCCT GTGCCTGCTG GTGGTGCGCA TCGTCAGACG CTGGCTGAAG
GAAGACTACC TTCCGACCAC CTCGCTCGAC GCCGGCATGC AGGCCTGGAC GGCCACGCTG
TTTGCCTATG CCGGCAACCT GCTGGCCTTG TCGCTGGGCC TGGCCGCCGT CGGCATCGGG
CTGGAGCGCA TTGCCTGGGT GGCCAGCGCG CTGTCGGTGG GCATCGGTTT TGGCCTGCAG
GCGGTGGTGC AGAATTTTGT CTCGGGCCTC ATCATGCTGG CCGAAAAGCC GGTCAAGGTC
GGCGACTGGG TGTCGCTGGG CGGCATCGAG GGCGACATCC GGCGCATCAA TGTGCGCGCG
ACCGAAATCC AGATGGGCGA CCGCTCCACC GTGATCGTTC CAAATTCGGA GTTCATCACC
AAGACCGTGC GCAATGTCAC CCACGCCAAT CCGCTGGGGC TGGTCAAGAT ATTGCTGCCC
GTGCCGCTGG CCGCCGATGC CGACCAGGTG CGCAGCCTGA TTCTGGAAAT CTTCGAGGCG
CATGCCGATG TGCTGAAAAC GCCCGAACCC GGCGTGCAGC TCGACAGCAT CGACAGCGGT
GCCGGCATGG TGTTTAACGC CACCGCATTC GTCAACTCGC CGCGCATGGC TTATGGCGTG
CGCAGCGCCT TGATGTTCGA AGTGCTCAGG CGGCTGCGCG AGGCCGGCAT TTCGCTGGTC
AAGCCGGCCG GCCTGGTGCT CAGGGAGGCG AGTGAACGCG CGCCGGAGCC GCCTGCGCAG
TGA
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| Protein sequence | MRIGLPRFLD SPSCRPDFFR GLLSLACAPR LAIIGVLLML AALCAQAQPG DVDISLDTAR
LKIEKARKTL DDPPKDAADL VPLRAQVLDA GTQAEAAAAL LSPQLASVQA RLDELGPLLP
GQVEAPDVAG LRTQLNKTRA ELDAQLKRAR LLAVESEQTA GEISALRRSE FQARLGERTS
SILSSLFWSE LRADLPGDAQ RAGRLFDGLA MAARASGAWV WSSVGLVLLV LLGLHAWAGH
ALLRLTTTRV PPGRLRRSLH AWTRVLLPTA SAGLMAEAVY LGLVWVTPLP DAVAPLMSRL
AGVICFGGYV VGLGHALLLP ARPSWRLLPL PDVLALKLRW LPPLLALLMV LTWAVVQLSA
QINASLVTTV AADCIVALVM VMLIALGLAQ SDFARRQALA TPESAASWPP SPLWLTSVVS
LAWAGVAVSL LALLLGYVAL GSFLVHQMAW IAVVLGSAYL LAVLIDDAFI TLLSPLATAA
GAPEAAGAAG EEPATPFFKV RRQAAVLLSG VGRLLVVALT LMLLLAPFGE GPSELFQRAD
KLHQGVSIGE FQIRPMSVLQ ALTVIGLCLL VVRIVRRWLK EDYLPTTSLD AGMQAWTATL
FAYAGNLLAL SLGLAAVGIG LERIAWVASA LSVGIGFGLQ AVVQNFVSGL IMLAEKPVKV
GDWVSLGGIE GDIRRINVRA TEIQMGDRST VIVPNSEFIT KTVRNVTHAN PLGLVKILLP
VPLAADADQV RSLILEIFEA HADVLKTPEP GVQLDSIDSG AGMVFNATAF VNSPRMAYGV
RSALMFEVLR RLREAGISLV KPAGLVLREA SERAPEPPAQ
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