| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2199 |
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| Symbol | |
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| ID | 4686415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2347255 |
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| End bp | 2348622 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639835209 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_982428 |
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| Protein GI | 121605099 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.496976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA TCAGGCGGGT CAGCCGCCAT GCGGCCACCA TCCTGGTCGG CCAGTTGGCC
GTGATGGCCT TCGGCGTTGC CGACACCGTG ATTGCCGGAC GCTACAGCGA TGCGGCGCTG
GCTGCGCTGT CGGTGGGCTC GGCCCTGTAC ATCAGCGTGT ATGTCGGGCT GATCGGCATC
GTGCAGGCGC TGCTCCCGAT CTGGGCCGAA ATGCTGGGTG CACGCCGGCA TGAAGCGGTC
GGGCGCTCGC TGCGGCAAAG CCTGTATTTG TGCGGTTTCA TCTGCATCGC GGGCATGGCC
GCCCTGCTGT TTCCGGGCGT GCTCCTTCGC TGGGCGCAGG TGCCCGCCCT GATGCAGGAC
GAAGTGCAGC GCTACCTCGC CGTGCTGGCC TTTGCCTTTG CCCCTTCCCT GCTGTTCCGG
CTCTACAGCA CCCTCAACCA GTCCCTGGGC AAGCCACGCC TGGTGACCTG GCTGCAGATT
GCCGCGCTGG GGCTCAAGAT CCCCTTGTCG ATCTGGCTGG TGGCCGGCGG CGGCGGTATC
GATGCCATGG GCGCCGTGGG CTGCGCCTGG GCCACGCTGG CGGTCAACTA CCTCCTGCTG
CTGCTGGCCG TGCTCATGCT GCGAACCCAG GGTATTTACC AGCCATACGC CATCTGGCGG
CGGATGGAGC GGCCCGACTG GCCGCAACTG CGCACCTTCG CCCGGCTCGG CATTCCCGGC
GGGCTGGCCT ACCTGGTGGA GGTGACGTCC TTCACGCTGA TGGCGCTGTT CATCGCGCGG
CTGGGAACCA TCGCTTCGGC CAGCCACCAA ATTGCCGCCA GCGTGGCGGC CGTGCTGTAC
ATGATGCCGC TGTCGATGGC GGTGGCCTGC AGCGCCCGGG TGTCGTTCTG GCTGGGCGCG
GGCCGGCCGG ACCACGCCAA ACGCGTGGTT TTCATGGGTT TGAAGCTCAC TGCGCTTATT
GCGCTTGCTC TGGCAGCTAT TTTTTCCATA GCAGGTCAGT TGCTGGCGGG CTGGTATTCG
GCAAGCCCCG AAGTGGTTGC GCTGGCCTCG ACCCTGCTGG TGTGGGTGGC CTTCTACCAT
GTGGCCGATG CGCTGCAGGC GCTGTGTGCG TTCTTGCTGC GCTGCTACCG CATCACGATG
GCGCCGCTGG CGCTGTACGG CGTGCTGCTC TGGGGGCTGG GCCTGTTTGG CGGCTACCAG
CTGGCTTATG TCGGCCTGGC GGGCCACGCA GCCACGCAAG CGGCCAGCAG CTTCTGGGCT
GCCAGCACGC TGGCCATCGC TCTGGTGGCC GCTTGCCTGC TGGGCTTGCT GCTGTACGCC
GTGCGGCGCA GCAGCCCCGC CACGGCAGAC AGCACTCAGG CCGCCTGA
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| Protein sequence | MSEIRRVSRH AATILVGQLA VMAFGVADTV IAGRYSDAAL AALSVGSALY ISVYVGLIGI
VQALLPIWAE MLGARRHEAV GRSLRQSLYL CGFICIAGMA ALLFPGVLLR WAQVPALMQD
EVQRYLAVLA FAFAPSLLFR LYSTLNQSLG KPRLVTWLQI AALGLKIPLS IWLVAGGGGI
DAMGAVGCAW ATLAVNYLLL LLAVLMLRTQ GIYQPYAIWR RMERPDWPQL RTFARLGIPG
GLAYLVEVTS FTLMALFIAR LGTIASASHQ IAASVAAVLY MMPLSMAVAC SARVSFWLGA
GRPDHAKRVV FMGLKLTALI ALALAAIFSI AGQLLAGWYS ASPEVVALAS TLLVWVAFYH
VADALQALCA FLLRCYRITM APLALYGVLL WGLGLFGGYQ LAYVGLAGHA ATQAASSFWA
ASTLAIALVA ACLLGLLLYA VRRSSPATAD STQAA
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