| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2194 |
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| Symbol | |
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| ID | 4686592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2340316 |
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| End bp | 2342883 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639835204 |
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| Product | exonuclease-like protein |
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| Protein accession | YP_982423 |
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| Protein GI | 121605094 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2887] RecB family exonuclease |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.759403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTTT CTTCTTCCCC CCAGCCTGCC GATACGGCAG TCTCCGTGGC TGCCCGCTGC
TGGCACCAGG CCATGCGGCG GCTGGCCGAA ATCATTGCTT CGCGCGGCCT CCATCCTTCC
GAGGTGGTCG TGCTGCTGCC GTATGCCCAG CTGATCCAGC AGGCGCGCCA GACCTGGGCC
GACAACGCCG GCGGCACCTT TTTTGTTCCG CGCTTTGAAA CCACCATGAA CTGGGCCACC
GGCCTGGGCG GCACGCTGGG CATGTTCACG CCGTCGGGTG TCGATCTGCG CATGGATGTG
TCGGTGGACA TGCTGACGGC CGCGTCGCTG CTGGGTCAGG CCGGGCTGGC CGCGCAGCAG
GATGCGCTGG CCGGCCGGCT GGTCGAGTCC GCCTGGAGCC TGGCCCGCGT GGCCGCCAGC
GTGCTGCCCG CCGAACGCCA GGCCTGGAGC GAGTCGCTCG CCGAGGCGCT GGGCGTGGGC
CTGGATTCGC CGGTGCTGGC GCTGGAGGCG GCCGTCGGGC GCATCGCGCT GGCCTGGGTC
GCGGCCTCTG GCTATGCATC GGACCGGCTG TTCCAGGCCG AGCCGGCGCT GTTGGTGGTG
GTCGAGGGCT TTCAGGTCGA GCCGGTGAAC GAGGCGCTGA AGCTTCATTT TGGCGAGCGG
GCGCTGTCGA TTGCGCTGTG CCTTCCCGAG GACGAGCCGG ACCGGCCCGG CGCGCCACAG
CCCTCGCTGC ATGCCGCGCT GGACGACGAG GACGAGGCCG CACGCGCCGC CGCCTGCGTG
CTGGCGCACC TGGCGCAGGG GCGCAGCCCG GTCGCGCTGA TCGCGCAGGA CCGCCAGCTG
ACCCGCCGGG TGGCCGCCAT GCTGGCCCGG CGCGGCATCG CCATGCGCGA TGAAACCGGC
TGGAAGCTGT CCACCTCGCG CGCGGCGGCC AGCCTGATGG GCCTGCTGCG CGCCTTGCCC
TGGGACGTAT CGACCGACGC CGTGCTCGAC TGGCTGAAAA ATGCCCCGGC CTTTGCCTCC
GGCACCGTCA CGGCGGCCGA AACCGAGGTG CGCAAGTTCG GCGTGCGCGC CTGGCGCGAC
CTGCCGGCCG CGCCGCTGGA GGCGCTGGCC GTCGCCCAGC CTTTGGCGCG GCAGGTCAAC
CAGTTGCGCG ACAGCCTGAG CCGTCCGCGC CCGCTGGCCG CCTGGCTGCG CGACCTGCGC
GCCGCGCTGC AGTCGGCCGG ACAGTGGGAA CTGCTCGCCA GCGACGAAGC CGGCCAGCGG
GTGCTCGATG TGCTGCGCTT GCATGAGGGC GCCGACATCG AGTTCGAAGA CGCGCCGGCC
ATGAAGCTCA GGGAGTTCAC CAGCTGGGTC AACCAGGCGC TGGAAGCGCA AACCTTCTCG
CCCGAGCACC CGGCGGCCGA GCAGGTGGTG ATCCTGCCGC TGGCGCAGTT GCTGGGCCGG
GCCATGCAGG CCGTGGTGCT GCCCGGCTGC GATGAAATCC GCCTGCCGGT GTCGCCCGAG
CCGCCCGGCC AGTGGACGCC CGGCCAGCGC GAACTGCTCG GCTTGCCGTC GCGCGAAGCG
CTGGCCCGCG TGGCCCGGCA GGCGTGGGAC TACACCCTGC AACTGCCCCA TGTGGACCTG
CTGTGGCGCA CCAGCGAAGC CGGCGAGCAC CTGATGCCCA GTGGTTTCGT GCAGGAAATT
CTGCTCAGCC GCAGCCTGGC GGCGGACCGG GCCGGCGACC CGCGCCGCCT GCGCGCCGTG
GCGGCCTGCC CGACGTTGCG GCCGCTGCCC ACGGGCGAGG CCTTGCCCGT CAGGCGGCTG
TCGGCCAGCA GCTATGGCGA TTTGCGCGCC TGTCCCTACC GTTTTTTTGC GCTGCGCCAG
CTCGGCCTGC ACGAATCCGA CGAACTGGAA AGCGAACTCG GCAAGCGTGA TTTCGGCAAC
TGGCTGCACA ACCTGCTCTG CCGCTTCCAT GAAGCATTAA AAGAGGCTCC CGCGCACGAC
CTGCCTGCAC GAATAGCTAT GATTAATGTA GCGGCAGAAC AAGCCGCCAA AGAGCTTGGC
CTGAGCCACA GCGAATTCCT GCCGTTTGCC GCCGCCTGGA CTCCGGTGCG CGACGGCTAC
CTGGCCTGGC TGGCCGGACA CGAAGCCACG GGTGCTCGCT TCGACATGGC CGAGCAGTGG
CTGGACATGC CGCTGGGCAG CGAGTTGACG CTGATCGGCA AGATCGACCG CATGGACCGG
CTGCCGGGCG GCGAGCTGCT GCTGATCGAC TACAAGACCG AGCCGCGCGC CACCACCGCC
GAGCGCATCA AAAACGGCCT GGAAGACTCG CAGCTGGCGT TCTACGCCGC CCTGGTGGCC
GACGACACGC TGGGCGCCGC CTATGTGAAC CTGGGCGAAA AAGAGCCGAC CCGCAGCTAT
GACCAGCCCG ACATCGTCGC CCTGCGCGAT GCCCTGATCG ACGGCATCCT GAGCGACATG
GCCCGCATTG CCGAGGGTGC GCCGCTGCCG GCGCTCGGCG AAGGCAAGGC CTGCGACTAC
TGCGCGGCAC GCGGCCTGTG CCGAAAAGAC TTCTGGAGTG AACCATGA
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| Protein sequence | MPLSSSPQPA DTAVSVAARC WHQAMRRLAE IIASRGLHPS EVVVLLPYAQ LIQQARQTWA
DNAGGTFFVP RFETTMNWAT GLGGTLGMFT PSGVDLRMDV SVDMLTAASL LGQAGLAAQQ
DALAGRLVES AWSLARVAAS VLPAERQAWS ESLAEALGVG LDSPVLALEA AVGRIALAWV
AASGYASDRL FQAEPALLVV VEGFQVEPVN EALKLHFGER ALSIALCLPE DEPDRPGAPQ
PSLHAALDDE DEAARAAACV LAHLAQGRSP VALIAQDRQL TRRVAAMLAR RGIAMRDETG
WKLSTSRAAA SLMGLLRALP WDVSTDAVLD WLKNAPAFAS GTVTAAETEV RKFGVRAWRD
LPAAPLEALA VAQPLARQVN QLRDSLSRPR PLAAWLRDLR AALQSAGQWE LLASDEAGQR
VLDVLRLHEG ADIEFEDAPA MKLREFTSWV NQALEAQTFS PEHPAAEQVV ILPLAQLLGR
AMQAVVLPGC DEIRLPVSPE PPGQWTPGQR ELLGLPSREA LARVARQAWD YTLQLPHVDL
LWRTSEAGEH LMPSGFVQEI LLSRSLAADR AGDPRRLRAV AACPTLRPLP TGEALPVRRL
SASSYGDLRA CPYRFFALRQ LGLHESDELE SELGKRDFGN WLHNLLCRFH EALKEAPAHD
LPARIAMINV AAEQAAKELG LSHSEFLPFA AAWTPVRDGY LAWLAGHEAT GARFDMAEQW
LDMPLGSELT LIGKIDRMDR LPGGELLLID YKTEPRATTA ERIKNGLEDS QLAFYAALVA
DDTLGAAYVN LGEKEPTRSY DQPDIVALRD ALIDGILSDM ARIAEGAPLP ALGEGKACDY
CAARGLCRKD FWSEP
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