| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2126 |
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| Symbol | |
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| ID | 4688988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2263454 |
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| End bp | 2265097 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639835137 |
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| Product | cyclohexanecarboxylate-CoA ligase |
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| Protein accession | YP_982356 |
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| Protein GI | 121605027 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR03208] cyclohexanecarboxylate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.191102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00946818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAATTCG ACCCCGTCCT GATCGCGCCC CGCCGGGCGC AAAGCGTGGC CCAGGGCTTC
TGGCACGACC GCACCATCAA TGATGAGCTG GACGCCTGCG TGGCCACTTG CCCGGACAAG
CTGGCGCTGA CCGCCATGCG GGCTGAAAGC GGCGCCACCA CGCGCTTCAC CTACCGCGAA
CTCGCCACCA TGGCGGATCG CGTGGCCGTC GGCCTGACCC GCCTGGGCGT GGGCCAGAGC
GACGTGGTGG CCTGCCAGCT GCCCAACTGG TGGCAGTTCA CCGTGACCTA CCTGGCCTGC
TCGCGCATTG GCGCGGTGAT GAACCCGCTG ATGCACATCT TCCGGGAGCG CGAGCTGTCC
TTCATGCTCA AGCACGGCGA GGCCAGGGTA TTGATCGTGC CCAAAGTGTT TCGCGGTTTT
GACTTCGAGC AGATGGTGAC CGCGCTGCAG CCCAGCCTGC CCGAGCTGAA GCAGATCGTG
GTGGTCGATG GCAGCGGCGC CAACAGCTTC GACGCGCTGC TGAGCGGCCC GGCCTGGGAA
GACGCCGCCG ATGCACAGGA CATCCTGACG CGCCACCGGC CCGGCCCCGA CGACGTGACG
CAGCTCATCT ACACCTCGGG CACCACGGGC GAACCCAAGG GCGTGATGCA CACGGCCAAC
ACCACCATGG CCAACATCAT TCCCTACGCC GAACGCCTGC GGCTGGGCGC CGACGACGTG
GTGCTGATGG CCTCGCCGAT GGCGCACCAG ACCGGCTTCA TGTATGGCCT GATGATGCCC
ATCATGCTGC GCGCCAGCGC CGTGCTGCTC GACATCTGGG AGCCGCTCAA GGCCATAGCC
CTGATTCGCG ACCAAGGGGC GACCTTCACC ATGGCCTCGA CCCCTTTTCT CACCGACCTG
GCCCGCACTG TGGCCGAGTC CGGCAAGGCC GTGCCGACGC TGCGCACCTT TCTGTGCGCC
GGCGCGCCCA TTCCCGGCGC GCTGGTCGAG CAGGCGCGGC GGGTGCTGGG CACCAAGATC
GTGTCGGCCT GGGGCATGAC CGAAAACGGC GCTGTCACCC TGATCAACCT TGACGACGAT
GACGAACGCG CCTTCACCAC CGACGGCTGT CCGCTGCCGG GCGTGGAACT CAAGGTGGTC
GATGGGGACG GCAGCGCGCT GCCTGCGGGC CAGGCCGGCC GGCTGCTGGT GCGCGCCTGC
TCCAACTTTG GCGGCTACCT CAAGCGCCCG CAGCTGAACG CCACCGATGC CGACGGCTGG
TTCGACACCG GCGACCTGGC CCAGCTGGAC GGGCAAGGCT ACGTCCGCAT CACCGGCCGC
AGCAAGGACG TGATCATTCG CGGCGGCGAG AACATTCCGG TGGTCGAGAT CGAGTATCTG
CTGTACCGGC ATCCGGCCAT CGCCATGGCG GCCATCGTGG CCTATCCGGA CGAACGGCTG
GGCGAGCGCG CCTGCGCCGT GGTGGTGCCC AAGCCGGGCC AGAGCATCGA CCTGCCCTCC
ATCGTTGAAT TCCTGAAATC CCAGAAAGTC GCCGTGCAGT ACATGCCCGA GCGGCTGATC
GTGCGCGATG CCATGCCGTC CACGCCCACC GGAAAAATCC AGAAGTTCAA GCTGCGCGAC
ATGCTTCAGG GCGGCACGGT TTAA
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| Protein sequence | MEFDPVLIAP RRAQSVAQGF WHDRTINDEL DACVATCPDK LALTAMRAES GATTRFTYRE
LATMADRVAV GLTRLGVGQS DVVACQLPNW WQFTVTYLAC SRIGAVMNPL MHIFRERELS
FMLKHGEARV LIVPKVFRGF DFEQMVTALQ PSLPELKQIV VVDGSGANSF DALLSGPAWE
DAADAQDILT RHRPGPDDVT QLIYTSGTTG EPKGVMHTAN TTMANIIPYA ERLRLGADDV
VLMASPMAHQ TGFMYGLMMP IMLRASAVLL DIWEPLKAIA LIRDQGATFT MASTPFLTDL
ARTVAESGKA VPTLRTFLCA GAPIPGALVE QARRVLGTKI VSAWGMTENG AVTLINLDDD
DERAFTTDGC PLPGVELKVV DGDGSALPAG QAGRLLVRAC SNFGGYLKRP QLNATDADGW
FDTGDLAQLD GQGYVRITGR SKDVIIRGGE NIPVVEIEYL LYRHPAIAMA AIVAYPDERL
GERACAVVVP KPGQSIDLPS IVEFLKSQKV AVQYMPERLI VRDAMPSTPT GKIQKFKLRD
MLQGGTV
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