| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2116 |
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| Symbol | |
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| ID | 4688420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2254519 |
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| End bp | 2255433 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639835127 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_982346 |
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| Protein GI | 121605017 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.160413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.283924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC TCAACCAACA GCAATTGCTG GACATCGTCA ACACCAAGCA CACCGCCCCC
GGCGACGCGC GGGTGCGCCA GCTCACCGCA CGCATCGTCA GCGACCTGTT CAAGACCATC
GACGAACTCG ATGTCAGCCC GGACGAGTTC TGGAAAGCCG TGGACTGGCT CAACCGCCTG
GCCCAGGGCG GCCAGGTCGG CCTGATCACC GCCGGCCTGG GTTTTGACCG CCTGCTGGAC
ATCCGCATGG ATGAAGCCGA CCAGAAGGCC GGCCGCGCCG CCGGCACGCC GCGCGCCATC
GAAGGCCCGC TGTTCGTGGC TGGCGCGCCC TCTTTCAAGG TCGAAGCGCG CCTGGACGCT
GGCGAGCCCA AGGGCGAAGT GTTCGTGATG GAAGGCCAGG TGCTCGACAC AGATGGCCAG
CCCGTGGCGC ACGCTCAGAT GGACGTGTGG CATGCCAACG AAGTCGGCGG CTATTCGCAC
TTCTTCCCTG GCATGCAGCC CTACGAGCTG CGTCGCCATA TCGAGACCGA TGCCAAAGGC
AACTACCGTT TCCGCTCCTT CCTGCCACCG GGTTACGCCA TTCCGCCCAA CAGCCCGACG
GCCGAACTGT TCACGGCGCT GGGCCGCCAT GGCAACCGCC CCGCGCACAT CCACTTCCTG
GTGGTGGCGC CCGGTCTGCG CACGCTGACC ACGCAGGTCA ATATTCCCGG CGACACCTAC
ATCGATGACG ACTTCGCCTT CGCCACGCGC GACGGCCTGA TCATCGAGAT CGAAAAGAAC
GTCGCCCCTG CTGGCTACGA GTCGCTGGGC ATCAGCGAGC CGTTCACCCG TTCGCGCTTT
AATTTTGTCC TGCAACAAGC GCTGAACGAC AGCGAGGCTT CGCCTGCCGC CCGCATGGCG
CGCGTTACCG CCTGA
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| Protein sequence | MTELNQQQLL DIVNTKHTAP GDARVRQLTA RIVSDLFKTI DELDVSPDEF WKAVDWLNRL
AQGGQVGLIT AGLGFDRLLD IRMDEADQKA GRAAGTPRAI EGPLFVAGAP SFKVEARLDA
GEPKGEVFVM EGQVLDTDGQ PVAHAQMDVW HANEVGGYSH FFPGMQPYEL RRHIETDAKG
NYRFRSFLPP GYAIPPNSPT AELFTALGRH GNRPAHIHFL VVAPGLRTLT TQVNIPGDTY
IDDDFAFATR DGLIIEIEKN VAPAGYESLG ISEPFTRSRF NFVLQQALND SEASPAARMA
RVTA
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