| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2115 |
|---|
| Symbol | |
|---|
| ID | 4688409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 2253952 |
|---|
| End bp | 2254410 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639835126 |
|---|
| Product | hemerythrin-like metal-binding protein |
|---|
| Protein accession | YP_982345 |
|---|
| Protein GI | 121605016 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2703] Hemerythrin |
|---|
| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.13266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.246162 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCA CTGAACCCCT TGACGCTTCC GGATCCCTGC AATGGAGCGA CCAGTTCCTG
CTGGGCTACA CGCCCATTGA CGAGGTGCAC CAGGAATTCG TTGACCTGAT GGGCCAGATG
CAGCGCGCCG AAGATGCCGC GCTGCCGGCC TTGCTGGCGC AGTTTTCCGT TCATCTGCAA
CATCATTTTG AGATGGAAAA CGAATGGATG GTGAGCACCG AATTTCCGCC CCGGGAGTGC
CACATGGACG AGCATGCGGC GGTGATGCAG TCGGTCGAGG AAGTGCAGGC GCTCTTGGCG
CAGGGCGACG TGGCGATCTG CCGCGACCTG GTGGCGCAGC TGGCCCAGTG GTTCCCCCAG
CATGCGGACC AACTCGATTC GGCCCTGGCG CACTGGATGT TCAGCAAGAC CATGGGCGGC
AAGCCGGTGG TGCTCAGGCG CGGCCTGTCC CTGCGCTAG
|
|---|
| Protein sequence | MTPTEPLDAS GSLQWSDQFL LGYTPIDEVH QEFVDLMGQM QRAEDAALPA LLAQFSVHLQ
HHFEMENEWM VSTEFPPREC HMDEHAAVMQ SVEEVQALLA QGDVAICRDL VAQLAQWFPQ
HADQLDSALA HWMFSKTMGG KPVVLRRGLS LR
|
|---|
| |