Gene Pnap_2091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2091 
Symbol 
ID4689091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2228535 
End bp2229446 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID639835102 
Productcarboxymethylenebutenolidase 
Protein accessionYP_982321 
Protein GI121604992 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.449099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.243646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCAC GCCTGACCGC TCAAGACTTC GACCAGGAAC TGCTGATCCT GTTTGATGCC 
TATGTCCACG GTAGCCTGGA CCGGCGCGGT TTTCTGGCCC AGGCGCAAAA GTTCGCCAAG
GCCGGCATCA CAGCCGCCGG CCTGCTGGCC GCGCTGAGCC CCGACTTTGC CGCCGGCCAG
CAGGTTCCCA AGGATGACGC GCGGCTGAAA ACCGAACGGC TGCGCTATCC CTCGCCCGCC
GGCACCGGCA GCGTCAGCGG CTACCTGGCG CGCCCGGCCA GCGCCGGCAC CGGCAAACTG
CCGGCGGTGC TGGTGATTCA CGAAAACCGG GGCCTGAACC CGCACATCGA AGACATCGTG
CGCCGCCTGG CGCTGGACGG CTTCATGGCC TTTGCACCCG ATGCGCTGAC GCCGCTGGGC
GGCTACCCCG GCGACGAGGA AAAGGCCCGC ACCGCCTTTG CCACGCTGGA CCAGGCCAAG
GCGCTGGAAG ATTTCGTGGC GGCGGCGCAG TGGCTCAAAA CCCGCGGCGA TGCCACCGGC
AAGCTCGGCG CGGTGGGCTT TTGCTACGGC GGCGGCATCG TGCATCTGCT GGCCACGCGC
CTGCCCGACC TGAATGCGGG CGTGCCCTTT TACGGCAACA CGCCTTCGCC CGCAGAGGCG
GCCAAGGTCA AGGCGCCCCT GCTGGTGCAG CAGGCCGCCG TGGACGAGCG CATCAACGCC
GCCTGGCCGG CCTATGAAGC CGCGCTGAAG GCGGCGGGCG TGAAGTACGC GGTGTACCAG
TACCCGGGCA CGCAGCACGG CTTCAACAAC GACACCACGC CGCGCTATGA CGCGGCAGCC
GCCAAACTGG CCTGGGAGCG CACGGTGGTT TTTCTCAAGG CCAGGCTACA GGGCGACTCG
GCCAGCACCT GA
 
Protein sequence
MPPRLTAQDF DQELLILFDA YVHGSLDRRG FLAQAQKFAK AGITAAGLLA ALSPDFAAGQ 
QVPKDDARLK TERLRYPSPA GTGSVSGYLA RPASAGTGKL PAVLVIHENR GLNPHIEDIV
RRLALDGFMA FAPDALTPLG GYPGDEEKAR TAFATLDQAK ALEDFVAAAQ WLKTRGDATG
KLGAVGFCYG GGIVHLLATR LPDLNAGVPF YGNTPSPAEA AKVKAPLLVQ QAAVDERINA
AWPAYEAALK AAGVKYAVYQ YPGTQHGFNN DTTPRYDAAA AKLAWERTVV FLKARLQGDS
AST